Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_032106.1 Length=4580 Score E Sequences producing significant alignments: (Bits) Value seq1 237 5e-59 >seq1 Length=3149860 Score = 237 bits (262), Expect = 5e-59 Identities = 625/947 (66%), Gaps = 8/947 (1%) Strand=Plus/Minus Query 3035 AGGTGGGAATGGGTGCCTGGGGGAAGTGTACACTCACAGTATAGTGAAGATGATGAGTAT 3094 || ||||||||||| || || |||||||| || || || || | ||||||| |||| || Sbjct 1821717 AGATGGGAATGGGTTCCGGGAGGAAGTGTTCATTCTCAATACAATGAAGATAATGAATAC 1821658 Query 3095 ATTTTTCCAGGACAATTCACTCGTAACAAGTTCATAACAGTAAACAAAATGCCTAAGCAT 3154 || || ||| ||| || ||||| | || |||| ||||| ||| Sbjct 1821657 ATCATTAAAGGTTTGCATACTATGAATAAGTTTGTCACTTTAAATCTCATGCCAAAGGCC 1821598 Query 3155 AAAATTGCTAGGATGATAGCATCGGCACCTGAAGTCAGAGCCTGGACTTCAACCAAATAT 3214 || |||||||| | | | ||| ||| | | || ||||||||||| ||||| Sbjct 1821597 AAGATTGCTAGCTTTTTTGGGAGTAAACCAGAAATACGTGCTTGGACTTCAACAAAATAC 1821538 Query 3215 GAGTGGGGCAAACAACGGGCAATATACGGCACAGATCTGAGGAGCACTCTAATAACTAAC 3274 || ||||| || || | || || || || ||||| || | || ||| | |||| || Sbjct 1821537 GAATGGGGAAAGCAGAGAGCGATTTATGGAACAGACTTGCGCAGTACTGTCATAAGCAAT 1821478 Query 3275 TTCGCTATGTTCAGATGTGAAGACGTGCTCACACATAAGTTTCCGGTAGGCGATCAGGCT 3334 || |||||||| ||||||||||| |||| ||| | |||||| ||||||| ||||| Sbjct 1821477 TTTGCTATGTTTAGATGTGAAGAGTCACTCAAACACATGTTTCCTATAGGCGAGCAGGCA 1821418 Query 3335 GAAGC-AGCTAAAGTACATAAACGAGTGAATATGATGTTGGACGGGGCATCCAGTTTTTG 3393 ||| | ||| |||||||| |||||| | | | ||||||| || |||||||| Sbjct 1821417 GAATCTAGC-AAAGTACACAAACGAATCAGTCAGATGTTGCTTGGTTATGATAGTTTTTG 1821359 Query 3394 TTTTGATTACGACGATTTCAACTCCCAACACTCTATAGCAAGCATGTACACAGTGCTAGT 3453 |||||| ||||| || ||||| || || ||||| || || ||| | |||| || Sbjct 1821358 TTTTGACTACGATGACTTCAATTCTCAGCACTCCATTTCATCAATGAAAGCAGTCTTATA 1821299 Query 3454 TGCGTTCAGGGACGCTTTTTGTAGGA--ATATGTCGGCGGAACAAAAAGAAGCCATGGAC 3511 ||| || ||||| ||| | || | ||||| || ||| | ||| ||| | Sbjct 1821298 TGCCTTTCATGACGCGTTT--AAAGATGACATGTCTAAAGATCAACTGGCAGCGATGCAA 1821241 Query 3512 TGGGTGTGCGAATCAGTCAAGCACATGTGGGTGCTAGATCCAGACAGTAAAGAGTGGTAT 3571 ||| || || ||| | | |||| | || ||||| | || ||||||| Sbjct 1821240 TGGACAATTGAGTCTGTCGAAAATATGTATGCTCTTGATCCTAATCTGAATTCGTGGTAT 1821181 Query 3572 CAGCTAAGAGGCACGTTACTATCAGGCTGGCGTTTGACTACATTCATGAATACTGTGTTG 3631 || || | || || || || || || ||| | || || ||||| ||||| || || ||| Sbjct 1821180 CATCTTCGTGGTACTTTGCTTTCTGGTTGGAGATTAACCACATTTATGAACACAGTCTTG 1821121 Query 3632 AATTGGGCATACATGCAGATAGCAGGAGTATTCGACATAGATGACGTTCAGGACTCAGTC 3691 ||||||| || ||| | || || || | || | | || | || || || || Sbjct 1821120 AATTGGGTTTATATGGATATTGCGGGTGCGTTTAAGGTTGAGGGGTTTTCTGATTCTGTT 1821061 Query 3692 CATAACGGTGATGACGTCATGATTAGTTTGAATAGGGTGAGTACCGCTGTACGGATTATG 3751 ||||| || |||||||| |||||||| | |||| | | | || || |||||| Sbjct 1821060 CATAATGGAGATGACGTGATGATTAGCCTAAATACAATTAAGGCAGCAGTCACAATTATG 1821001 Query 3752 GATGCTATGCACAAAATAAATGCCAGGGCTCAACCTGCTAAATGTAATCTGTTCTCCATA 3811 | ||| ||| ||||| || || ||| | || |||||| | || || || Sbjct 1821000 CACAAAATGAGTTTAATCAATGCTAGAGCCCAAGTAACAAAGTGTAATGTTTTGTCTATT 1820941 Query 3812 AGCGAGTTCCTCAGGGTCGAACATGGCATGAGCGGAGGCGACGGGCTGGGCGCTCAGTAT 3871 || || || | ||||| ||||| || |||| || || || |||| ||||| ||| Sbjct 1820940 AGTGAATTTTTAAGGGTTGAACACGGAATGAAAGGTTCAGATGGATTGGGAGCTCAATAT 1820881 Query 3872 CTAAGTAGGTCCTGCGCAA-CACTAGTCCACAGTAGAATTGAGTCAAACGAACCACTGTC 3930 || | ||||| | |||| || || | || ||||||||||| |||||||| ||| | || Sbjct 1820880 CTTACAAGGTCAAGTGCAACCATTACT-CATAGTAGAATTGAATCAAACGAGCCAATTTC 1820822 Query 3931 CGTAGTCCGCGTCATGGAGGCCGACCAAACCAGGCTGAAGGATTTGG 3977 ||| | | | || || || ||| |||| || || ||||||| Sbjct 1820821 AGTATTAAGATTGATTGAAGCAGACGAAACTAGACTTCGCGATTTGG 1820775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14543996977575