Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_029096.1 Length=5003 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-21 >seq1 Length=3488706 Score = 113 bits (124), Expect = 1e-21 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 3572 AAGTATGAGTGGGCAAAGCAGCGAGCAATATATGGAGTAGACTTGACAAGCTCCATAATA 3631 ||||||||||||| |||||||| || |||||||| || | ||| | | ||| Sbjct 1799264 AAGTATGAGTGGGGCAAGCAGCGTGCCATATATGGTACTGATCTCCGAAGTACTGTCATA 1799205 Query 3632 ACTAATTTCGCTATGTTTAGATGTGAAGAAGTCTTTAAGCACCGATTTCCGGTAGGAGAG 3691 | |||||||| ||||| ||||| || ||| | ||||||| |||||| | ||||| Sbjct 1799204 AGCAATTTCGCGATGTTCAGATGCGAGGAATCCCTTAAGCATATGTTTCCGATCGGAGAA 1799145 Query 3692 GAAGCAGCAGCTAGTAGAGTACATAAAAGGCTTAAAATGATGCTAGATGGTAACGAGTCT 3751 | || | ||| |||| ||| ||||||||| || ||| | |||| | || Sbjct 1799144 CAGGCCGAAGCGAGTAAAGTTCATAAAAGGATTGGCCATATGTTGAATGGATATGACAGC 1799085 Query 3752 TTTTGTTATGATTTTGATGATTTTAATGCCCAACATTCAA 3791 ||||||| ||||| ||| ||||||||| |||| ||||||| Sbjct 1799084 TTTTGTTTTGATTATGACGATTTTAATTCCCAGCATTCAA 1799045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15897598261200