Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118035.1_202017-03- 24] 10 sequences; 17,147,083 total letters Query= NC_032106.1 Length=4580 Score E Sequences producing significant alignments: (Bits) Value seq1 318 2e-83 >seq1 Length=3488706 Score = 318 bits (352), Expect = 2e-83 Identities = 651/960 (68%), Gaps = 8/960 (1%) Strand=Plus/Minus Query 3035 AGGTGGGAATGGGTGCCTGGGGGAAGTGTACACTCACAGTATAGTGAAGATGATGAGTAT 3094 || ||||||||||||||||| || ||||||||||||||||| | |||||||||| || Sbjct 1799438 AGATGGGAATGGGTGCCTGGAGGCAGTGTACACTCACAGTACATTGAAGATGATCCCTAC 1799379 Query 3095 ATTTTTCCAGGACAATTCACTCGTAACAAGTTCATAACAGTAAACAAAATGCCTAAGCAT 3154 || || ||| | | || || |||||| ||||| | || | ||||| || Sbjct 1799378 ATAATTAAAGGGTTGTATTCCCGAAATAAGTTCGTAACATTGAATATGATGCCAAAAGGG 1799319 Query 3155 AAAATTGCTAGG-ATGAT--AGCATCGGCACCTGAAGTCAGAGCCTGGACTTCAACCAAA 3211 ||||| | || || | || | | | || ||||| || || |||||||| ||||| Sbjct 1799318 AAAATCG--AGTCATTCTTCAGGAGCCCC-CCGGAAGTTAGGGCATGGACTTCCACCAAG 1799262 Query 3212 TATGAGTGGGGCAAACAACGGGCAATATACGGCACAGATCTGAGGAGCACTCTAATAACT 3271 |||||||||||||| || || || ||||| || || ||||| | || ||| | |||| Sbjct 1799261 TATGAGTGGGGCAAGCAGCGTGCCATATATGGTACTGATCTCCGAAGTACTGTCATAAGC 1799202 Query 3272 AACTTCGCTATGTTCAGATGTGAAGACGTGCTCACACATAAGTTTCCGGTAGGCGATCAG 3331 || ||||| ||||||||||| || || || | |||| ||||||| | || || ||| Sbjct 1799201 AATTTCGCGATGTTCAGATGCGAGGAATCCCTTAAGCATATGTTTCCGATCGGAGAACAG 1799142 Query 3332 GCTGAAGCAGCTAAAGTACATAAACG-AGTGAATATGATGTTGGACGGGGCATCCAGTTT 3390 || ||||| |||||| |||||| | | || || |||||| | || ||| || Sbjct 1799141 GCCGAAGCGAGTAAAGTTCATAAAAGGATTGGCCAT-ATGTTGAATGGATATGACAGCTT 1799083 Query 3391 TTGTTTTGATTACGACGATTTCAACTCCCAACACTCTATAGCAAGCATGTACACAGTGCT 3450 |||||||||||| |||||||| || ||||| || || || | |||| | | || | Sbjct 1799082 TTGTTTTGATTATGACGATTTTAATTCCCAGCATTCAATCACTTCCATGAAAGCTGTCTT 1799023 Query 3451 AGTTGCGTTCAGGGACGCTTTTTGTAGGAATATGTCGGCGGAACAAAAAGAAGCCATGGA 3510 || || |||||| | | || ||||||| | |||||| ||||| ||| Sbjct 1799022 GAAAGCTTTTTTGGACGCATACTCAAGCGATATGTCTCAAGCACAAAAGGAAGCAATGAT 1798963 Query 3511 CTGGGTGTGCGAATCAGTCAAGCACATGTGGGTGCTAGATCCAGACAGTAAAGAGTGGTA 3570 ||| | || || | |||| | || |||||| | | | |||||| Sbjct 1798962 ATGGACAATTAATTCGGTGGACAGAATGTTCGCTCTTGATCCAAATACAAGCATGTGGTA 1798903 Query 3571 TCAGCTAAGAGGCACGTTACTATCAGGCTGGCGTTTGACTACATTCATGAATACTGTGTT 3630 | || | || ||||| ||||| |||||||| |||||||| |||||||| || || || Sbjct 1798902 TAGACTTAATGGGACGTTGCTATCGGGCTGGCGCTTGACTACTTTCATGAACACGGTTTT 1798843 Query 3631 GAATTGGGCATACATGCAGATAGCAGGAGTATTCGACATAGATGACGTTCAGGACTCAGT 3690 ||| |||||||| ||| | || || |||| || ||| | || | || ||| || || Sbjct 1798842 GAACTGGGCATATATGGACATTGCTGGAGCTTTTGACGTTGAAGGATTTTCGGATTCTGT 1798783 Query 3691 CCATAACGGTGATGACGTCATGATTAGTTTGAATAGGGTGAGTACCGCTGTACGGATTAT 3750 ||||| || || || || ||||| || ||||||| | || | ||||| ||| || Sbjct 1798782 TCATAATGGAGACGATGTTATGATCAGCTTGAATACAATCGGTGCAGCTGTTAAGATAAT 1798723 Query 3751 GGATGCTATGCACAAAATAAATGCCAGGGCTCAACCTGCTAAATGTAATCTGTTCTCCAT 3810 | | ||| | |||||||||| ||||| ||| | | |||||||| | | || || Sbjct 1798722 GCAAAAAATGAAAGAAATAAATGCAAGGGCACAAGTTACCAAATGTAACATTCTTTCAAT 1798663 Query 3811 AAGCGAGTTCCTCAGGGTCGAACATGGCATGAGCGGAGGCGACGGGCTGGGCGCTCAGTA 3870 ||| || || | || ||||||||||| |||| || || ||| | || || || || Sbjct 1798662 AAGTGAATTTTTAAGAGTCGAACATGGAATGAAGGGGCATGATGGGTTAGGAGCGCAATA 1798603 Query 3871 TCTAAGTAGGTCCTGCGCAACACTAGTCCACAGTAGAATTGAGTCAAACGAACCACTGTC 3930 || | || || || ||||| | || |||||||| ||||| || || ||| | || Sbjct 1798602 CCTTACCAGATCATGTGCAACGATCACTCATAGTAGAATAGAGTCGAATGAGCCAATTTC 1798543 Query 3931 CGTAGTCCGCGTCATGGAGGCCGACCAAACCAGGCTGAAGGATTTGGCCAACAGAACATC 3990 || | || | || ||||| || |||| | |||| || || | | |||||| || Sbjct 1798542 AGTTATTCGATTGATTGAGGCAGATGAAACACGTTTGAAAGACTTAGAGAGCAGAACCTC 1798483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14543998409250