Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_003745.1 Length=4579 Score E Sequences producing significant alignments: (Bits) Value seq16 408 1e-110 >seq16 Length=1189108 Score = 408 bits (452), Expect = 1e-110 Identities = 691/994 (70%), Gaps = 10/994 (1%) Strand=Plus/Minus Query 2966 GACATGTTCGAAGGATCAAAGCAGACGTATAAATATCCCTTTATGACGTGGGATGACTAC 3025 || ||||| || | || ||| | | ||| ||||||| | ||||||||||||||||| Sbjct 904303 GAAATGTTTGAGGATTCCAAGAAATCCTATGAATATCCTTGCATGACGTGGGATGACTAT 904244 Query 3026 ACTGCAAAC-AGATGGGAGTGGGTTCCAGGTGGCAGTGTCCACTCTCAATACGAAGAAGA 3084 |||||| |||||||| ||||| || |||||||||||||| ||||| || | | ||| Sbjct 904243 G-TGCAAAGTAGATGGGAATGGGTGCCCGGTGGCAGTGTCCATTCTCAGTATGCTGCAGA 904185 Query 3085 CAACGATTATATCTATCCTGGTCAGTATACTAGGAACAAGTTCATAACTGTTAACAAAAT 3144 | || ||||| |||||| || || | ||||| |||||||| || || || Sbjct 904184 TGATGAATATATAATTCCTGGATTATACACACGTAACAAATTCATAACAGTGAATCTCAT 904125 Query 3145 GCCCAAACACAAAATATCTAGAATGATAGCATCACCGCCTGAGGTACGAGCTTGGACGTC 3204 ||| ||||| ||| | || ||| | || | || || ||| |||| ||||| || Sbjct 904124 GCCGAAACAGAAACTTGCTTCCATGGGAATCTCGACTCCCGAAGTAAGAGCATGGACTTC 904065 Query 3205 GACGAAGTACGAATGGGGCAAGCAACGTGCTATCTACGGGACGGATCTACGAAGTACACT 3264 ||| || || || ||||| ||||| | ||||| ||||| || || ||||||||||| | Sbjct 904064 GACAAAATATGAGTGGGGTAAGCAGAGAGCTATTTACGGCACAGACCTACGAAGTACGTT 904005 Query 3265 GATAACTAACTTTGCAATGTTCAGGTGCGAGGATGTTCTCACTCACAAGTTCCCAGTAGG 3324 ||||||||| | ||||||||||||||| || ||||| || | || ||||| || ||||| Sbjct 904004 GATAACTAATTATGCAATGTTCAGGTGTGAAGATGTACTAAAACATAAGTTTCCCGTAGG 903945 Query 3325 CGACCAGGCAGAGGCAGCAAAGGTGCACAAACGGGTGAACATGATGCTGGACGGTGCCTC 3384 || || || |||||| | | || || || || | |||||||| | | | || Sbjct 903944 GGATCAAGCCGAGGCATCGAGAGTCCATAAGAGGATTTCTATGATGCTCGGCAACTCATC 903885 Query 3385 TAGTTTCTGCTTCGATTATGATGACTTCAATTCTCAGCATTCAATAGCTAGTATGTATAC 3444 ||||||||||| ||||||||||| || || || || ||||| |||| |||||| |||| Sbjct 903884 AAGTTTCTGCTTTGATTATGATGATTTTAACTCCCAACATTCCATAGGCAGTATGCATAC 903825 Query 3445 GGTTTTGTGCGCTTTCAGGGACACATTTAGTCGCAACATGTCTGATGAACAAGCAGAGGC 3504 || || ||||| ||||| | ||| | | | ||| | | || | || Sbjct 903824 CGTATTAGTAGCTTTTAGGGATGCTTTTTCCCCCCAAATGGCACCCGCCCAGCTCAAAGC 903765 Query 3505 GATGAACTGGGTGTGTGAGTCCGTCAGACACATGTGGGTACTAGATCCTGATACCAAGGA 3564 ||| | |||||||||||||| | |||| | |||||| ||| || || Sbjct 903764 AATGGATTGGGTGTGTGAGTCGATATTGAGGATGTATGCGAAAGATCCAACTACTAATGA 903705 Query 3565 GTGGTACAGACTACAAGGTACATTACTGTCAGGATGGCGGTTAACCACATTTATGAACAC 3624 |||||| || || || || || || ||||||||||| | ||||| || ||||| || Sbjct 903704 ATGGTACCATCTTCAGGGCACTTTGCTCTCAGGATGGCGACTCACCACCTTCATGAATAC 903645 Query 3625 TGTGCTAAACTGGGCGTATATGAAATTAGCTGGCGTATTTGATCTGGATGACGTTCAAGA 3684 || || |||||||| || ||||| |||| || || ||||| | | || || || || Sbjct 903644 AGTCCTCAACTGGGCATACATGAAGGTAGCGGGTGTGTTTGACATCCAGGATGTACAGGA 903585 Query 3685 CTCGGTACACAACGGTGATGATGTTATGATTAGTCTCAACCGCGTGAGCACAGCAGTAAG 3744 || ||||| || ||||| ||||| ||||||||| | || || || || ||| || Sbjct 903584 TTCTGTACATAATGGTGACGATGTAATGATTAGTTTGAATCGAGTATCAACTGCAATACA 903525 Query 3745 AATAATGGACGCTATGCACCGGATAAATGCGCGAGCACAGCCGGCGAAGTGTAACTTGTT 3804 | ||||| ||| || || || || | ||||| ||| || ||||| | || Sbjct 903524 GGTTATGGAACGGATGAGACGCATCAACGCCAGGGCACAAGAGGCAAAATGTAATCTCTT 903465 Query 3805 TTCGATAAGTGAATTTCTGAGGGTAGAACACGGTATGAGCGG---AGGCGATGGTCTTGG 3861 |||||| ||||| || || || || || || || |||| || | || || || || Sbjct 903464 TTCGATCAGTGAGTTCCTAAGAGTGGAGCATGGAATGACTGGTAAAAGC---GGCCTAGG 903408 Query 3862 GGCTCAGTACTTAAGTAGGTCTTGTGCTACTCTTGTACACAGTAGGATTGAGTCTAACGA 3921 || || ||||||| ||||| ||||| || |||||||||||||| || || ||| || Sbjct 903407 TGCACAATACTTAACAAGGTCATGTGCGACCCTTGTACACAGTAGAATCGAAAGTAATGA 903348 Query 3922 ACCACTGTCAGTAGTACGAGTTA-TGGAAGCAGA 3954 ||| | || |||| || |||| |||| || || Sbjct 903347 ACCCATATCTTTAGTCCG-GTTATTGGAGGCTGA 903315 Score = 201 bits (222), Expect = 3e-48 Identities = 954/1490 (64%), Gaps = 42/1490 (3%) Strand=Plus/Minus Query 579 CCTGATTGGGCACAGTTTTCTGAATCATTTCCATCAATCGACGTCCCGTACCTAGATGTT 638 || || |||| || || ||||||| | || ||||| || || ||||||| || | Sbjct 906689 CCAGAATGGGTGCATTTCACTGAATCTATGCCTTCAATTGATGTTTCGTACCTTGACTTG 906630 Query 639 AGGCCATTGACCGTAACGGAAGTCAATTTCGTGCTTATGATGATGAGTAAGTGGCATAGA 698 | ||||| || ||| ||||| ||||| || ||||||||| | || ||| || Sbjct 906629 CGACCATTAACGAATGTGGAGGTCAACTTCGTCCTCATGATGATGTGCAAATGGTCAAGG 906570 Query 699 CGTACTAACTTAGCGATAGACTACGAGGCACCCCAACTAGCTGATAAGTTCGCTTACCGC 758 | |||||| | || || || | || ||| | | || |||| || || ||||| Sbjct 906569 CAAACTAACCTCGCTATTGATTTTGATTTACCTAATTTGGCGGATAGATTTGCGTACCGG 906510 Query 759 CATGCGCTTACTGTTCAAGACGCTGACGAGTGGATAGAAGGCGATAGAACTGATGACCAG 818 ||| | || ||| | || || || || ||| | ||||| || ||||| | Sbjct 906509 CATTCAGCTAATGTGAACGAGGCAGATGAATGGCTTATTGGCGAGAGGGTTGATGCCTCC 906450 Query 819 TTCCGcccccccTCGTCTAAAGTAATGTTATCGGCACTTCGTAAGTACGTGAACCATAAC 878 |||| || || ||| || || |||||| | | |||||||| || || || Sbjct 906449 TTCCCGGTTCCATCAAGTAAGACTATTTTGTCGGCAATAAGGAAGTACGTTAATCACAAT 906390 Query 879 AGGCTGTACAATCAGTTTTACACTGCAGCACAACTGTTAGCTCAAATTATGATGAAACCT 938 || | | ||| || ||| | || || || ||| | || || || |||||| ||||||| Sbjct 906389 AGAGTCTTCAACCACTTTGAAACGGCCGCTCAAGTATTGGCCCAGATTATGGTGAAACCG 906330 Query 939 GTCCCTAACTGCGCTGAGGGCTACGCTTGGCTGATGCATGACGCATTGGTCAATATACCA 998 |||| || ||||||| || |||| ||| || | || || | | || || || || Sbjct 906329 ATCCCGAATAGCGCTGAAGGTCACGCCTGGTTGCTAAATAACCCGATTGTAAACATTCCC 906270 Query 999 AAATTTGGGTCTATTCGAGGAAGGTACCCCTTTTTGTTATCAGGTGATGCAGCGTTGATT 1058 ||||| || || |||||||| | || || || | || |||| || || ||||| | Sbjct 906269 AAATTCGGATCAGTTCGAGGACGATATCCTTTCCTTCTAACAGGCGAAGCGGCGTTAGTC 906210 Query 1059 CAGGCTACAGCCCTAGAAGACTGGTCTGCTATCATGGCGAAACCCGAGCTGGTGTTCACT 1118 ||||| || || ||||||| ||| | || || | | ||||| ||| | | || ||| Sbjct 906209 CAGGCAACTGCTTTAGAAGATTGGGCCGCCATAGTAGGCAAACCTGAGATTCTTTTTACT 906150 Query 1119 TACGCGATGCAGGTGTCAGTAGCGTTAAACACCGGACTATACTTACGTCGCGTTAAGAAA 1178 || ||| || | || || || | || || || ||||||| ||| | ||||| Sbjct 906149 TATGCGCTGAGCCTTTCTGTTGCTGTCAATACTGGGTTATACTTGCGTAATATCAAGAAG 906090 Query 1179 ACAGGCTTCGGCACAACTATAGATGACAGCTATGAAGATGGAGCGTTTT---TGCAACCG 1235 ||||| | ||| | || || ||||| |||||||| ||||| |||||| ||| || Sbjct 906089 ACAGGAATGGGCTCTACCATTGATGATAGCTATGAGGATGG--CGTTTTCCTTGCT-CCT 906033 Query 1236 GAGACGTTCGTTCAGGCCGCACTAGCATGTTGTACCGGACAAGATGCGCCCCTAAATGGG 1295 ||| | || || || ||| | || ||| || || ||||||| || || || || Sbjct 906032 GAGTCATTTATTGCCGCTGCAGTGGCTTGTGCAACAGGTGAAGATGCACCGCTGAACGGT 905973 Query 1296 ATGTCAGATGTGTATGTCACTTATCCAGATCTTCTAGAATTTGATGCTGTTACACAAGTA 1355 ||| | || ||||| ||| ||||| | || | || | ||| |||| || || Sbjct 905972 ATGGCTGACGTGTACGTCTTCTATCCTCAGTTTGTGGATCTCGATACTGTGACGTTGCTA 905913 Query 1356 CCCATCACG-GTCATTGAGCCCGCTGGCTATAACATTGTTGATGAT--CATTTAGTGGTT 1412 || | || ||| || || |||||||| | ||| || |||| || ||| Sbjct 905912 CCGG-CGCGAGTCCGGGAACCAAAGGGCTATAATGTAGTTAGCGAAGGCATTAAG--GTT 905856 Query 1413 GTGGGTGTACCTGTGGCATGTTCACCATACATGATATTTCCAGTAGCTGCGTTTGATACT 1472 || || ||||| | ||||| |||| | | | | ||| | || || ||||| Sbjct 905855 GTCGGCGTACCCTTAAGCTGTTCTCCATTCTTCGTCTATCCTCTGGCAGCTTTTGAAGAG 905796 Query 1473 GCAAATCCTTACTGTGGGAATTT---TGTCATTAAGGCTGCTAACAAGTATCTCCGTAAG 1529 || |||||||||| || || |||| || || | || ||| ||||| Sbjct 905795 GCCAATCCTTACTCAGGTGCCTTCACTGTCGGAAACGCGAC---CAGATAT----GTAAG 905743 Query 1530 GGTGCCGTGTATGATAAACTC-----GAAGCATGGAAGTTGGCCTGGGCACTGAGGGTAG 1584 || | ||| || |||| || |||||||| |||||||||||| || ||| Sbjct 905742 GGGTATGGCTATT-TATACTCCTTTTGAGGCATGGAAATTGGCCTGGGCAGCTAGAATAG 905684 Query 1585 CCGGGTATGACACTCACTTCAAAGTGTATGGCGATACACACGGCTTAACTAAGTTCTATG 1644 |||| || |||||||| ||| | | ||| || ||| || || |||||| || | Sbjct 905683 CCGGTTACGACACTCATGTCATAATACCTGGTGACACAACAGGATTGGATAAGTTATACG 905624 Query 1645 CTGACAACGGTGACACATGGACACACATACCTGAATTTGTCACTGACGGTGAC-GTGATG 1703 | || ||| |||| ||||||| || ||||| || | | | | | | ||| |||| | Sbjct 905623 CGGATAACTCTGACTCATGGACCCATATACCCGATTCCTTTAGTAAAGCTGAGTGTGA-G 905565 Query 1704 GAAGTATTCGTTACTGCCATCGAACGC--AGAGCTAGACATTTCGTTGAACTACCTAGAC 1761 || | ||| | ||| ||| | ||| |||||||| || || | |||| Sbjct 905564 TTCGTGTATATTAAAG--ATCTAACTCGAAGAAAAAGACATTTTGTGGACTTTCCTAACA 905507 Query 1762 TGAATTCACCAGCATTCT-TCAGATCTGTAGAAGTCAGCACCACTATATATGATACTCAT 1820 ||| | |||| || | | ||| ||||||| ||| || | |||| | || Sbjct 905506 TGACTAATCCAGGGTTTGCTAAAATCA-TAGAAGTGCGCATAACACTTCATGACATGTAT 905448 Query 1821 GTGCAGGCTGGTGCGCATGCGGTGTATCATGCTAGTCGAATCAATCT-TGATTATGTTAA 1879 | |||| | | | | || | |||| | | || | | ||||||||| Sbjct 905447 ATCGAGGCAGCTCCAGGTACGAGATCGAGGGCTA-TGGCATATAACAATGATTATGTGCC 905389 Query 1880 GCCTGTTTCGACCGGCATTCAGGTGATCAATGCGGGCGAACTTAAG-AACTACTGGGGTA 1938 || ||| | | || || |||||| ||| ||| ||| |||| | || || ||||||| Sbjct 905388 ACCAGTTGCTTCAGGTATGCAGGTGGTCAGTGCATCCGA-CTTACGTAATTATTGGGGTA 905330 Query 1939 GTGTGCGTCGTAC-TCAGCAGGGTTTAGGAGTGGTAGGTCTTACGATGCCAGCTGTAATG 1997 ||| | | || || || |||||||| | |||||| ||||||||||||| ||||| Sbjct 905329 CTGTCAGAAGAACATCGGC-GGGTTTAGCGCTAGTAGGTTTTACGATGCCAGCAGTAATT 905271 Query 1998 CCTACCGGAGAACCTACAGCTGGCGCTGCCCACGAAGAGTTGATAGAACA 2047 ||||| ||| ||||| |||||| | | | ||||| |||||| || Sbjct 905270 CCTACAGGAAGGCCTACCGCTGGCACAGACTTGCAAGAGGCGATAGAGCA 905221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14540792684160