Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_029096.1 Length=5003 Score E Sequences producing significant alignments: (Bits) Value seq16 98.7 3e-17 >seq16 Length=1189108 Score = 98.7 bits (108), Expect = 3e-17 Identities = 331/510 (65%), Gaps = 14/510 (3%) Strand=Plus/Minus Query 3572 AAGTATGAGTGGGCAAAGCAGCGAGCAATATATGGAGTAGACTTGACAAGCTCCATAATA 3631 || |||||||||| |||||| |||| || || || |||| | ||| | | ||| Sbjct 904060 AAATATGAGTGGGGTAAGCAGAGAGCTATTTACGGCACAGACCTACGAAGTACGTTGATA 904001 Query 3632 ACTAATTTCGCTATGTTTAGATGTGAAGAAGTCTTTAAGCACCGATTTCCGGTAGGAGAG 3691 ||||||| || ||||| || |||||||| || | || || ||||| ||||| || Sbjct 904000 ACTAATTATGCAATGTTCAGGTGTGAAGATGTACTAAAACATAAGTTTCCCGTAGGGGAT 903941 Query 3692 GAAGCAGCAGCTAGTAGAGTACATAAAAGGCTTAAAATGATGCTAGATGGTAACGAGTC- 3750 |||| | || ||||| ||||| ||| || |||||||| | | ||| || Sbjct 903940 CAAGCCGAGGCATCGAGAGTCCATAAGAGGATTTCTATGATGCTCG---GCAACTCATCA 903884 Query 3751 --TTTTTGTTATGATTTTGATGATTTTAATGCCCAACATTCAACAGGGTCCATGTATGCA 3808 ||| || | ||||| |||||||||||| |||||||||| | ||| ||| || | Sbjct 903883 AGTTTCTGCTTTGATTATGATGATTTTAACTCCCAACATTCCATAGGCAGTATGCATACC 903824 Query 3809 GTACTCCAGGCATACATGGATGTTTTTAGAGGCAGCATGTCTAGAGACCAGGTCTCGGCA 3868 ||| | || | | ||||| |||| | ||| | | |||| || ||| Sbjct 903823 GTATTAGTAGCTTTTAGGGATGCTTTTTCCCCCCAAATGGCACCCGCCCAGCTCAAAGCA 903764 Query 3869 ATGGAATGGGTGCGTGATAGTATATTAAGCGTTAAAGTGCATAATCATGAGGAAGGTAGA 3928 ||||| |||||| |||| ||||| || | | ||| || || | || Sbjct 903763 ATGGATTGGGTGTGTGAGTCGATATTGAGGATGTA--TGCGAAA----GATCCAACTACT 903710 Query 3929 GAGGAGTTTTACAAGACGGATGGGACTTTATTATCAGGATGGCGCTTAACTACATTCATG 3988 | || | ||| | | || ||||| | ||||||||||| | || || |||||| Sbjct 903709 AATGAATGGTACCATCTTCAGGGCACTTTGCTCTCAGGATGGCGACTCACCACCTTCATG 903650 Query 3989 AATACTGCCTTAAATTATATATATTTCAAACTAGCTGGAGCCTTCGACGTTACTGGA-GT 4047 ||||| | | | || | ||| | || |||| || | || ||| | | ||| || Sbjct 903649 AATACAGTCCTCAACTGGGCATACATGAAGGTAGCGGGTGTGTTTGAC-ATCCAGGATGT 903591 Query 4048 ACGGGATTCTGTGCACAATGGGGACGATGT 4077 || ||||||||| || ||||| |||||||| Sbjct 903590 ACAGGATTCTGTACATAATGGTGACGATGT 903561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15897592001520