Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 6e-14 >seq4 Length=1325655 Score = 87.8 bits (96), Expect = 6e-14 Identities = 172/252 (68%), Gaps = 8/252 (3%) Strand=Plus/Minus Query 405 GCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATT 464 || || |||||| ||| | |||||||||| ||| || |||| || || |||||||| Sbjct 112752 GCTCTGTACGACCTCAACGCTACGGAACCCGGAGAGCTGTCTTTTCGAAAGGGCGACATC 112693 Query 465 ATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACC 524 || | || || ||||| || | || ||||||||| || || || | || ||| | Sbjct 112692 ATCACAGTGCTGGAGTCGGTCTTCAGAGACTGGTGGCGAGGCTCGCTCAGGGGCCAGGTC 112633 Query 525 GGCATCTTCCCCCTCAACTATGTCGAGAAGC----TGCAGGATCCTACCAAGGAGGAGCT 580 ||||||||||| || ||||| ||| | || ||| || || ||| | ||| | Sbjct 112632 GGCATCTTCCCTCTAAACTACGTC---ATGCCCATTGC-CGAGCCCACCCCCGCAGAGAT 112577 Query 581 CGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCT 640 || | ||| || ||| ||| | || ||| || ||| || ||| | || ||||| Sbjct 112576 TGAAAAAGAGGCGCAGGAGGAACTGTCTGTGTTTTCGCAGAGCAGAAACATTGAAAAGCT 112517 Query 641 GCTAGCTCTGCT 652 |||||| ||||| Sbjct 112516 GCTAGCGCTGCT 112505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945592326180