Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq35 190 7e-45
>seq35
Length=250949
Score = 190 bits (210), Expect = 7e-45
Identities = 241/327 (74%), Gaps = 7/327 (2%)
Strand=Plus/Plus
Query 373 GAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAAC 432
||||||| || || || || ||| || || ||||| |||||||| ||||| |||||
Sbjct 24533 GAACCACGGCGGCGACGGTTAGCCGGGTCCGAGCCCTGTACGACTTTACGCCGTCGGAGG 24592
Query 433 CCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGG 492
| |||||| | | ||| || |||||| | ||||| || ||||| || |||||||
Sbjct 24593 CGGGCGAGCTCGAGTTCAAAAAGGGCGACGTCATTGCCGTCCTCGAAAGCGTATACAAGG 24652
Query 493 ACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGA 552
|||||||| || || || || ||||| ||||||||||| |||||||| || || |
Sbjct 24653 ACTGGTGGCGCGGATCGCTCAAGGGCCAGACGGGCATCTTCCCGCTCAACTACGTGGACA 24712
Query 553 AGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCT 612
||||| |||||| || || ||||| || | || || || |||||||| || ||||
Sbjct 24713 AGCTGACGGATCCGACGCCAGACGAGCTGCAGCGCGAGGCGCACATGGAGGCCGAGGTCT 24772
Query 613 TTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG---CACTAGTTCGAGTG 669
|||| || ||||||||||| ||||||||||| | || ||||| | | | || |||
Sbjct 24773 TTGCCGAAATCAAGAACGTAGAGAAGCTGCTGACGCTACTGAGCGCCTCCAACACG-GTG 24831
Query 670 CCGACGCTAG--GGACAATGAGGAGAT 694
||| || || |||||||||||||||
Sbjct 24832 CCG-CGGGAGGAGGACAATGAGGAGAT 24857
Score = 96.9 bits (106), Expect = 1e-16
Identities = 154/221 (70%), Gaps = 15/221 (7%)
Strand=Plus/Plus
Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760
||| ||||| ||||| || | |||||||| ||| ||||| |||||||| ||||| ||
Sbjct 24934 GCTTTACCATCAGACACTGGCCATACGGCCCAAGCTGATCAGGCTCATTGAGAAGTACTC 24993
Query 761 GCAAAAGAAGGGTAAGTG--GAATCTTTTACGCGAATTTGT--------GTGTTGGCCAC 810
||| |||||||||| ||| | | | ||| | | | | | || |
Sbjct 24994 GCAGAAGAAGGGTACGTGTGGCTGCCATGACGAGGACGGGGACCGGCCCGCGCTGACTTG 25053
Query 811 TGATCGTG-----TTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGC 865
||| || | || ||| || ||||||||||||||||| |||||||||||||| |||
Sbjct 25054 TGACCGGGCCGATTTGTAGACGACTTCACGCAGCTCAACGAAAAGTTCATCAAGGCGCGC 25113
Query 866 CGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| |||||||| | || || || | || |||||||| ||
Sbjct 25114 CGGGACTACGAGGCGCTGCTGGAGTCGTCCATGTCGCAGCC 25154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945499193910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |