Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq35 190 7e-45 >seq35 Length=250949 Score = 190 bits (210), Expect = 7e-45 Identities = 241/327 (74%), Gaps = 7/327 (2%) Strand=Plus/Plus Query 373 GAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAAC 432 ||||||| || || || || ||| || || ||||| |||||||| ||||| ||||| Sbjct 24533 GAACCACGGCGGCGACGGTTAGCCGGGTCCGAGCCCTGTACGACTTTACGCCGTCGGAGG 24592 Query 433 CCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGG 492 | |||||| | | ||| || |||||| | ||||| || ||||| || ||||||| Sbjct 24593 CGGGCGAGCTCGAGTTCAAAAAGGGCGACGTCATTGCCGTCCTCGAAAGCGTATACAAGG 24652 Query 493 ACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGA 552 |||||||| || || || || ||||| ||||||||||| |||||||| || || | Sbjct 24653 ACTGGTGGCGCGGATCGCTCAAGGGCCAGACGGGCATCTTCCCGCTCAACTACGTGGACA 24712 Query 553 AGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCT 612 ||||| |||||| || || ||||| || | || || || |||||||| || |||| Sbjct 24713 AGCTGACGGATCCGACGCCAGACGAGCTGCAGCGCGAGGCGCACATGGAGGCCGAGGTCT 24772 Query 613 TTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG---CACTAGTTCGAGTG 669 |||| || ||||||||||| ||||||||||| | || ||||| | | | || ||| Sbjct 24773 TTGCCGAAATCAAGAACGTAGAGAAGCTGCTGACGCTACTGAGCGCCTCCAACACG-GTG 24831 Query 670 CCGACGCTAG--GGACAATGAGGAGAT 694 ||| || || ||||||||||||||| Sbjct 24832 CCG-CGGGAGGAGGACAATGAGGAGAT 24857 Score = 96.9 bits (106), Expect = 1e-16 Identities = 154/221 (70%), Gaps = 15/221 (7%) Strand=Plus/Plus Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760 ||| ||||| ||||| || | |||||||| ||| ||||| |||||||| ||||| || Sbjct 24934 GCTTTACCATCAGACACTGGCCATACGGCCCAAGCTGATCAGGCTCATTGAGAAGTACTC 24993 Query 761 GCAAAAGAAGGGTAAGTG--GAATCTTTTACGCGAATTTGT--------GTGTTGGCCAC 810 ||| |||||||||| ||| | | | ||| | | | | | || | Sbjct 24994 GCAGAAGAAGGGTACGTGTGGCTGCCATGACGAGGACGGGGACCGGCCCGCGCTGACTTG 25053 Query 811 TGATCGTG-----TTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGC 865 ||| || | || ||| || ||||||||||||||||| |||||||||||||| ||| Sbjct 25054 TGACCGGGCCGATTTGTAGACGACTTCACGCAGCTCAACGAAAAGTTCATCAAGGCGCGC 25113 Query 866 CGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || |||||||| | || || || | || |||||||| || Sbjct 25114 CGGGACTACGAGGCGCTGCTGGAGTCGTCCATGTCGCAGCC 25154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945499193910