Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 1e-21
>seq3
Length=560494
Score = 113 bits (124), Expect = 1e-21
Identities = 192/274 (70%), Gaps = 6/274 (2%)
Strand=Plus/Minus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
||| || || ||||| || ||||| || || ||||||||||| |||||| | | |
Sbjct 152489 CTGAAAGAACCGCAGCAACAGTCTCACGTGTCCGCGCCCTTTATGACTTCGCAGCAAGTG 152430
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
|||| || ||| || | |||| |||||| | ||| | || | || |||| || |
Sbjct 152429 AACCAGGGGAGCTGACCTTCCATCGAGGCGATGTCATTACCGTCATTGAATCTGCTTATA 152370
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGG-ACAGACCGGCATCTTCCCCCTCAACTATGTC 548
||||||||||| ||||| |||||||| |||| || ||||| || |||||||||
Sbjct 152369 AGGACTGGTGGCGCGGTTCCCTGCGTGGCACAGTT-GGTATCTTTCCAACAAACTATGTC 152311
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA- 607
||||| ||| || || || | | ||| || | | |||| |||| | || ||
Sbjct 152310 GAGAACTTGCCTGAACCAACACAAGCGGAACTTCAACGTGAAG--CAGAAGAAGAACGAC 152253
Query 608 -AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCT 640
||||||||||| ||||||||||||||| ||
Sbjct 152252 GTGTCTTTGCGGAAGCCAAGAACGTGGAGAAACT 152219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945592326180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |