Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 113 1e-21 >seq3 Length=560494 Score = 113 bits (124), Expect = 1e-21 Identities = 192/274 (70%), Gaps = 6/274 (2%) Strand=Plus/Minus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 ||| || || ||||| || ||||| || || ||||||||||| |||||| | | | Sbjct 152489 CTGAAAGAACCGCAGCAACAGTCTCACGTGTCCGCGCCCTTTATGACTTCGCAGCAAGTG 152430 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 |||| || ||| || | |||| |||||| | ||| | || | || |||| || | Sbjct 152429 AACCAGGGGAGCTGACCTTCCATCGAGGCGATGTCATTACCGTCATTGAATCTGCTTATA 152370 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGG-ACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||||||||| ||||| |||||||| |||| || ||||| || ||||||||| Sbjct 152369 AGGACTGGTGGCGCGGTTCCCTGCGTGGCACAGTT-GGTATCTTTCCAACAAACTATGTC 152311 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA- 607 ||||| ||| || || || | | ||| || | | |||| |||| | || || Sbjct 152310 GAGAACTTGCCTGAACCAACACAAGCGGAACTTCAACGTGAAG--CAGAAGAAGAACGAC 152253 Query 608 -AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCT 640 ||||||||||| ||||||||||||||| || Sbjct 152252 GTGTCTTTGCGGAAGCCAAGAACGTGGAGAAACT 152219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945592326180