Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq37 134 4e-28 >seq37 Length=558888 Score = 134 bits (148), Expect = 4e-28 Identities = 232/336 (69%), Gaps = 7/336 (2%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 ||||||| |||||||| ||||| ||||| | ||| | || ||| || | ||| ||| Sbjct 352938 CATCTGGGACCACAGCCGCTACTGTCTCTAGAGTTAGAGCACTTCACAATTTCCAACCCA 352879 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | || | | || || || || || ||||| || ||| | || | | || || | Sbjct 352878 CAGATGCAGATGAATTACAGTTTCGAAAGGGCGATATCATTACAGTCATAGGATCGGTAT 352819 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 | || || ||||||| ||| || ||| | || |||| || || ||||| || || |||| Sbjct 352818 ATAAAGATTGGTGGAGGGGCTCCCTGAGAGGGAAGACTGGTATTTTCCCTCTGAATTATG 352759 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 |||| ||| || |||||| || | ||| || || | | ||||| || |||||||| | Sbjct 352758 TCGAAAAGTTGGTGGATCCCACAACGGAAGAACTACAACGGGAAGCGCAAATGGAGGCCG 352699 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT-----AG 661 | || ||||| ||||| ||||| ||||||||| | || | | |||| ||| | Sbjct 352698 AGGTTTTTGCAGAGATTAAGAATGTGGAGAAGTTACTCACATTATTGAGTACTTCAACAT 352639 Query 662 TTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC 697 || | | || ||| | || |||||||||||||| Sbjct 352638 CTCAATTA--GATGCTCGTGATAATGAGGAGATCAC 352605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945544888020