Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq7584 145 2e-31 seq74940 80.6 8e-12 >seq7584 Length=2182 Score = 145 bits (160), Expect = 2e-31 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 465 ATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACC 524 ||||| || || ||| ||||||||| ||||||||| ||||||||| || |||| Sbjct 367 ATTGCAGTCCTGGAGAGTGTGTACAAAGACTGGTGGCGTGGTTCTCTGAAGGGCAAGACG 426 Query 525 GGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAG 584 ||||| ||||| || ||||| ||||||||| | |||||| ||| || ||||| || Sbjct 427 GGCATTTTCCCTCTTAACTACGTCGAGAAGTTAACGGATCCAACCCCCGACGAGCTGCAG 486 Query 585 AGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTA 644 | || | |||||||||||||| || ||||||||||||||||| || || ||| |||| Sbjct 487 CGGGAGGTGCAGATGGAGGCGGAGGTGTTTGCGGAGATCAAGAATGTTGAAAAGTTGCTG 546 Query 645 GCTCTGCTGAGCACT 659 | ||| ||||| || Sbjct 547 ACGCTGTTGAGCGCT 561 >seq74940 Length=855 Score = 80.6 bits (88), Expect = 8e-12 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 ||||||| || |||||||| ||||||||||| |||||||| || || |||| || | Sbjct 823 CAGATGACTTTACGCAGCTGAACGAGAAGTTTATCAAGGCTCGACGGCACTATGAGTCGA 764 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGT 925 | |||||||| | ||||| || || ||||||| | ||| ||| Sbjct 763 TGCTTGAAGCGGCCATGTCCCAGCCTCCGCAGCCTGCCTATGGT 720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15922875028500