Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq16 86.0 2e-13 >seq16 Length=261230 Score = 86.0 bits (94), Expect = 2e-13 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 393 TCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGC 452 || || ||||| || | |||||||| | ||| | || || |||||| | |||||| | Sbjct 193802 TCTCGAGTTCGAGCATTGTACGACTTTTCCCCCACAGAGCCAGGCGAGCTTGCTTTCTCC 193861 Query 453 AAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTG 512 || || || || ||| | || || ||| | ||||||||| |||| || Sbjct 193862 CGCGGAGAGATCATCCGGGTGTTGGACAGCGTCTACGAACACTGGTGGAGGGGTGAAGTG 193921 Query 513 CGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAG 572 | || || |||| ||||| ||| |||||||||||||| |||| ||||| ||| Sbjct 193922 AGAGGCGAGGCCGGTATCTTTCCCGTCAACTATGTCGAGGTTCTGCCCGATCCCACCCCC 193981 Query 573 GAGGAGCTCGAGAGAGAAGCTCAGATGGAGGC 604 | ||||| |||| ||||| |||||||||| Sbjct 193982 GCCGAGCTGCAGAGGGAAGCAGAGATGGAGGC 194013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15942912070140