Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2779 123 8e-25 >seq2779 Length=60829 Score = 123 bits (136), Expect = 8e-25 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 374 AACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACC 433 |||||| | | || ||||||||||| ||||| || |||||||||| ||| || |||| Sbjct 23073 AACCACCACGCCCACTGTCTCCCGCGTCCGCGCGCTCTACGACTTCAAGCCTTCCGAACA 23132 Query 434 CGGCGAG-TTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGG 492 |||||| | ||||||| | || |||||||| || ||| ||| | | || ||| | Sbjct 23133 GGGCGAGCTCGGCTTTCTG-AAGGGCGACATCATCCGGGTCCTCTATGCGGTCTACGACC 23191 Query 493 ACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGA 552 ||||||||| ||| || || || || |||||||||||| | ||||||||||||| Sbjct 23192 ACTGGTGGAGGGGCGAGCTTCGGGGCGAGGTCGGCATCTTCCCTGTGAACTATGTCGAGA 23251 Query 553 AGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGC 604 ||| ||||| ||| || || || ||| || || |||||||||| Sbjct 23252 TCTTGCCCGATCCGACCCCGGCTGATCTGCAGAAGGAGGCCGAGATGGAGGC 23303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945096318360