Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq47 84.2 7e-13 >seq47 Length=1968370 Score = 84.2 bits (92), Expect = 7e-13 Identities = 98/131 (75%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 417 TTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTC 476 |||| |||| | |||| ||||| | | ||||| ||||||||||||||| |||| | Sbjct 1100789 TTCA-GCCCACCGAACAAGGCGAACTCGGTTTCCAGAAAGGCGACATTATTCGGGTTATT 1100731 Query 477 GAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCC 536 ||| ||| ||| |||||||||||| ||| ||||||| || | || |||||||| Sbjct 1100730 GAGAGTGTCTACCGGGACTGGTGGAAAGGTGAATTGCGTGGCCAAATGGGTATCTTCCCT 1100671 Query 537 CTCAACTATGT 547 | |||||||| Sbjct 1100670 GTTAACTATGT 1100660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945591454155