Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 190 7e-45 >seq3 Length=759389 Score = 190 bits (210), Expect = 7e-45 Identities = 217/285 (76%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 376 CCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCG 435 |||| || || |||||||| || || || || || |||||||| ||| ||||| ||| Sbjct 100243 CCACTGCTGCAACCGTCTCGCGTGTCCGGGCGCTGTACGACTTTGAGCCTACGGAATCCG 100184 Query 436 GCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACT 495 ||||| | || ||| | ||||| ||||| || || ||||| || || |||| |||||||| Sbjct 100183 GCGAGCTAGCGTTCAGGAAAGGTGACATCATCGCCGTTCTGGAATCAGTGTTCAAGGACT 100124 Query 496 GGTGGAAGGGTTCTCTGCGTGGACAGACC-GGCATCTTCCCCCTCAACTATGTCGAGAAG 554 ||| ||| || || || | || |||||| || || ||||| || ||||| ||||||||| Sbjct 100123 GGT-GAAAGGATCGCT-CAGGGCCAGACCTGGTATTTTCCCTCTGAACTACGTCGAGAAG 100066 Query 555 CTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTT 614 ||| ||| | || ||||||||| ||| || || |||||||||||||||| || Sbjct 100065 CTGGCAGAT-CGACGCCGGAGGAGCTACAGAAGGAGGCCGAGATGGAGGCGGAAGTATTC 100007 Query 615 GCGGAGATCAAG-AACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 || |||| ||| |||||||| |||||||| | |||||||||| Sbjct 100006 GCACAGATTAAGAAACGTGGAAAAGCTGCTGTCGATGCTGAGCAC 99962 Score = 93.3 bits (102), Expect = 1e-15 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||||| ||||| |||| || ||| | || |||||| || |||| | Sbjct 100652 TCAAGTCGAAGATCCTGGAGCGCATGGAGGACTGGGCAGAAATGTTCAGCAAGGACCCGG 100593 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT 117 | || || |||||||||||||| || |||||||| ||| ||||||||| || Sbjct 100592 AGCTGGGGATCATGGAGCAGGCGTACATGAGGCTAAAGTCACAAAGTGAGT 100542 Score = 80.6 bits (88), Expect = 8e-12 Identities = 73/91 (80%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 816 GTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACG 875 || || |||| || || ||| ||||||||||||||| ||||||| ||||||||||||| Sbjct 99726 GTTTTACAGACGACTTGTCGCC-CTCAACGAGAAGTTCGTCAAGGCGCGCCGCGACTACG 99668 Query 876 AAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || ||||||| || | || ||||| || || Sbjct 99667 AAGCCCTCCTAGATACGTCCATGTCACACCC 99637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945528145140