Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_027212.1 Length=5704 Score E Sequences producing significant alignments: (Bits) Value seq211096 87.8 6e-14 >seq211096 Length=3128 Score = 87.8 bits (96), Expect = 6e-14 Identities = 212/318 (67%), Gaps = 7/318 (2%) Strand=Plus/Minus Query 4016 AAGTGGGCTTGGGCCATTAGTCAT--GCAACTAACGCAGACGGTAGTCTAAAAGAGGATT 4073 || ||||| ||||| |||| ||| ||||| || | ||| || | || || ||||| | Sbjct 897 AAATGGGCATGGGC-ATTA-TCAAAGGCAACCAATGAAGATGGGACCCTTAAGGAGGAGT 840 Query 4074 ACGACCTATATGAAGAAGCACTGAAAGAAAGAACCAATAGTGTTA-TAGCATTGAAAGAA 4132 |||| | ||||| || ||||||||||||| || || | || ||||| || ||||| Sbjct 839 ACGATTTGTATGACGAGTCACTGAAAGAAAG-ACAAACCGCCATAGTAGCACTGGAAGAA 781 Query 4133 GAACCGGCGAAAACCAGAGAAATNNNNNNNNNNNNNNTGGCATCGTACCTACGTCAATCT 4192 ||| | | || |||||| | || | | |||||||| ||||| | | Sbjct 780 GAAGCACCTAAGACCAGACAGATAATTTCAACACCTTTATCTTCGTACCTTCGTCAGTGT 721 Query 4193 TATTTGATGTATCGTTGGGGGAAACCTAACATACCTTCCCCTATATCAACTGCTACTTGG 4252 || ||| | ||||| |||| | ||| |||| ||| |||||||| ||| | | Sbjct 720 TACTTGTTATATCGATGGGCG-TTCCTGACATTCCTAGTCCTATATCTTCTGATTAATAT 662 Query 4253 ATGGGTAAATTCGAAAGAGCGAGTCCATCATGGTATGGAAGTATTGACGGTGAACGGTTC 4312 | | |||| ||| || | |||| | | ||||| | |||||||| || ||||| Sbjct 661 CTCCCTCAATTTGAATCTGCCAATCCACCTTTTTATGGGTGCATTGACGGAGATAGGTTC 602 Query 4313 GACCACTCTGTTCCAAAA 4330 ||||| || |||| ||| Sbjct 601 GACCAGTCCATTCCGAAA 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18098871537445