Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_016874.1 Length=3780 Score E Sequences producing significant alignments: (Bits) Value seq141 78.8 2e-11 >seq141 Length=1682505 Score = 78.8 bits (86), Expect = 2e-11 Identities = 166/245 (68%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 545 TTACGTCGCACCGCCATTCTACGAGAAAGAGGGGAAAATTGTATGGGAGAAGACAAGACA 604 ||||| || || || || |||| | || ||| | || || ||||| |||| | ||| Sbjct 299178 TTACGACGTTCCTCCGTTTCACGAAAGAGGGGGCGAGATAGTCTGGGAAAAGATGA-ACA 299120 Query 605 GCCC-GTGCTTTCGGTACTACCTTTACTGCTGCATGGAGCCGGCCACCTAGCTATAATGC 663 || || || || || ||||| | || | || || | |||||||| | ||| ||| Sbjct 299119 TACCTGTCCTATCTGTCCTACCGCTTTTGATTCACGGGACGGGCCACCTGGTTATTATGA 299060 Query 664 ACTTTACCAATGTCGTGACCGAAGTGGACTGCATAATGTGTATACAACATTGGATGGACT 723 |||| ||| | ||||||| ||| | ||| |||| ||||| |||||||||||||| | Sbjct 299059 ACTTGACCGAGGTCGTGAACGAGATCGACACCATAGCTTGTATCCAACATTGGATGGATT 299000 Query 724 GCCTACCAGGAGGGTTCCAGGACCGGAAGCTAAAGACGAAGAGCCACTTAAGCAATTGGC 783 | || || |||| ||||| |||| || ||| ||| || | | |||||| Sbjct 298999 GTCTGAAGGGGGGGTATCAGGATATGAAGTTAGCAACGCAGAAGCATCTGACAAATTGGT 298940 Query 784 TCCCT 788 | ||| Sbjct 298939 TACCT 298935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11975955927250