Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_025218.2 Length=8021 Score E Sequences producing significant alignments: (Bits) Value seq2793 113 2e-21 seq918 78.8 5e-11 >seq2793 Length=12006 Score = 113 bits (124), Expect = 2e-21 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 6131 ATGCACATACTACAGAAAAGTGAAGCGGGGAAAGTGCGGAGTGTTGTAAAGACAGGGGAT 6190 |||||| || | ||||||||||||| | ||| | ||| || || ||||| || || Sbjct 10185 ATGCACGTAATGCAGAAAAGTGAAGGGTCAAAAATCCGGCCAGTCGTCAAGACGGGAAAT 10244 Query 6191 AAAGTGAACCGCAAAATGAATTATCTCAGCGGG-TACCTGGAAGATGGCTTACATGGCAG 6249 |||| ||||| |||||||| || || || | | ||||||| ||| | || || Sbjct 10245 GAAGTAAACCGAAAAATGAACTA-CTTGTCGACATTCTTGGAAGACGGCCTGCACGGGTC 10303 Query 6250 CCCCCTCAGCACTCTGTTTGCGGGGGAGGCTGGCAACGAAAGAATTGATTTTGACCTGAT 6309 || || ||||| ||||||||||| ||||| || || |||| ||| || | |||||||| Sbjct 10304 GCCGCTTAGCACACTGTTTGCGGGCGAGGCCGGGAATGAAAAAATCGACTACGACCTGAT 10363 Query 6310 TGACGCTGTGCGCGACGAATCCACCTGGAAGGTTCCCCTTGATCAGGGCGCGTTCGACGA 6369 || || || || || | |||||||| || || || ||||| | || ||| | Sbjct 10364 AGAGGCAGTACGGTGTGAGGCGTTATGGAAGGTGCCTCTCGACCAGGGGGGATTTGACCA 10423 Query 6370 GAAGCAGAGTAAAATGTCGAT 6390 | | ||||||||| ||| || Sbjct 10424 GCACCAGAGTAAAGAGTCAAT 10444 >seq918 Length=13036 Score = 78.8 bits (86), Expect = 5e-11 Identities = 110/150 (73%), Gaps = 6/150 (4%) Strand=Plus/Minus Query 6455 GCGGTATGGGCGGCGTTGTGGGATAGCTTGTTCGTCCGGGGCGCGCTGGTT--GAGTGGG 6512 ||||| |||| |||||||||||||||| | || | || ||| || ||| | ||||| Sbjct 4550 GCGGTGTGGGAGGCGTTGTGGGATAGCCTCTTTGGCCTGGGGGCATCGGTCAGGTGTGGG 4491 Query 6513 CGG-ACGAGTCTCGGCCTTGGAAGAATGGATTGCCTTCGGGCTGGAGGTGGACGGCTGTA 6571 | | |||| ||| |||| ||||| ||||| ||||| |||||||||||||| | Sbjct 4490 CCTCATGAGT-TCGAG--TGGATTAATGGGTTGCCATCGGGATGGAGGTGGACGGCAATC 4434 Query 6572 TTGGACACCATCCTGAACGTGTGCAGCTTC 6601 |||||||||| || || | || || ||| Sbjct 4433 CTGGACACCATACTCAATATTTGTAGTTTC 4404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25550198775640