Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17] 4,253,097 sequences; 27,602,653,187 total letters Query= NC_011591.1 Length=3437 Score E Sequences producing significant alignments: (Bits) Value seq2224 77.0 7e-11 >seq2224 Length=565506 Score = 77.0 bits (84), Expect = 7e-11 Identities = 136/198 (69%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 2590 CCCAAATTTCTTTCCTGTTATTGGTTAGAGGATGGAAGGCCCATAAGGCCATCTCACGAG 2649 || ||||||||||| ||||| ||||| | | ||| ||||| | || | | || Sbjct 90423 CCAAAATTTCTTTCATGTTACTGGTTGCACAACGGACTTCCCATTCGTCCGGCATATGAT 90482 Query 2650 AACTTGGAGAAGCTGCTCTATCCAGAAGGGGTTCATGCAAATATTGACGATTATATCGCA 2709 | | ||||| ||| || | |||||| || | || || | | || |||||| | | Sbjct 90483 AGCAAGGAGAGGCTACTATGTCCAGAGGGCATCCACCAAAGTCTAGAGGATTATGAGGGA 90542 Query 2710 GCAGTTTTATCCATGGTTGTAGACAATCCATTCAATCACCACAATATTAACCATCTCAAG 2769 ||||| ||| | ||||| || || ||||| |||||| |||||| | | || || | | | Sbjct 90543 GCAGTATTAGCAATGGTGGTCGATAATCCTTTCAATGACCACACTGTCAATCAGGTGATG 90602 Query 2770 CACAGATAC---ATCATA 2784 ||||| ||| |||||| Sbjct 90603 CACAGGTACCTTATCATA 90620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10379983740210