Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_011591.1 Length=3437 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 5e-13 >seq2 Length=108997779 Score = 84.2 bits (92), Expect = 5e-13 Identities = 403/630 (64%), Gaps = 18/630 (3%) Strand=Plus/Minus Query 2097 CTATGGTGTCTGTATGAGAAGGGCTCTGGTGGAAAGGAGATTGATAACTGATGATGGCGG 2156 |||||| |||| ||| | ||||| |||||||| || | || || || | | Sbjct 75161866 CTATGGGATCTGCATGCGGCATGCTCTAGTGGAAAGACCTTTTGTGACC-ATCATCGGTG 75161808 Query 2157 GGTTATCCATATTG-ACGGGATGGTACCAAGTGGGTCACTCTGGACTGGATGGTTGGACA 2215 || ||| || | || | || ||||| |||||||| ||| | ||||| || | | || | Sbjct 75161807 GGGTATTCACAATGGATGGCATGGTGCCAAGTGGATCATTATGGACAGGTTTCCTTGATA 75161748 Query 2216 CGGCTTTAAACATCTTGTATATTAAGTCCGTTCTTCGGTCTATTGATATATTGGAGGAGG 2275 || | | ||||| | ||||| | | | | ||| | ||| | | | ||| || Sbjct 75161747 CGACCCTCAACATACTCTATATCACGACAGCTCTCTTGGATATGGGTTTTACTGAGAGGG 75161688 Query 2276 AGGCGGTCCCGAAGTGCGCCGGGGATGACAATCTAACGGTCT--TCAGTAAGGATCCTGG 2333 |||| || || || ||| || ||||||||||| || | | ||||| ||||| | Sbjct 75161687 AGGCAGTGCCTAAATGCTGTGGCGATGACAATCTGACTTTATTCTCAGT--CGATCCCAG 75161630 Query 2334 AGATGAAGTGCTCGAAGAAATGAGGGTTAAGCTGAATGATTATTTTAGGGCTGGGATTAA 2393 |||| | || || ||| ||| | ||||| | ||| ||||||| ||| | Sbjct 75161629 AGATAATGTAATCCTCGAATTGAAGCGGCGTCTGAACTCCTTCTTTCGGGCTGGTATTGA 75161570 Query 2394 GAAAGAGGACTTCATCATTACCCGGCCTCCCTTCCATG----TGAGGACTTTCCAGGCGG 2449 | || ||||| ||||| ||||| |||||||| |||| | |||| || || | Sbjct 75161569 AGACGATGACTTTATCATCACCCGTCCTCCCTTTCATGTATTTAAGGA----GCAAGCAG 75161514 Query 2450 TCTTCAAGGAAGGAACCGACCTATCGAAGGGGACATCGAAGATAATGAAGAAGGCTTATT 2509 | ||| || | | |||||| | | | ||||| || ||||| || ||| | || || Sbjct 75161513 TTTTCGAGCCAAGGACCGACTTGAGGCATGGGACTTCTAAGATCATCAAGCAAGCAGTTT 75161454 Query 2510 GGCGTGAGTTTGA-AGATGAATTGAGGATCGACCAGGAGAAGGGCTTGTCACATAGGTGG 2568 || | | ||| | |||||| | || || || || | || |||| || ||||| Sbjct 75161453 GG-GAGCCTTTCACAGATGAGATTCTCATTGATCAAGATGAAGGAATGTCTCACCGGTGG 75161395 Query 2569 GAGTACAGGTTTAAAGGGGCTCCCAAATTTCTTTCCTGTTATTGGTTAGAGGATGGAAGG 2628 ||| |||| || || || ||||| || || |||||| | | | |||| Sbjct 75161394 CGTTACCATTTTATCGGCAAGCCAAAGTTTCTGTCTTGCTATTGGCTGGTGAATGGGTTA 75161335 Query 2629 CCCATAAGGCCATCTCACGAGAACTTGGAGAAGCTGCTCTATCCAGAAGGGGTTCATG-C 2687 || || |||||||| || || || | ||||| | | | ||| | ||||| | || | Sbjct 75161334 CCTATCAGGCCATCACATGATAATCTCGAGAAATTATTGTTTCCCG-AGGGGCTGGTGAC 75161276 Query 2688 AAATATTGACGATTATATCGCAGCAGTTTT 2717 | |||||| || ||| ||| | ||||| Sbjct 75161275 GACTATTGAGGACTATGAGGCATCTGTTTT 75161246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10886334749640