Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq528360 185 3e-43 seq420618 93.3 1e-15 >seq528360 Length=395 Score = 185 bits (204), Expect = 3e-43 Identities = 216/291 (74%), Gaps = 3/291 (1%) Strand=Plus/Plus Query 351 CAGCATCAAGCTATTGC---ATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCC 407 |||| ||||||| ||| | || || ||||| || || ||| ||| || || Sbjct 105 CAGCCTCAAGCTGATGCCCAACAAGGCACGACAGCCGCCACTGTCAGCCGAGTCAAGGCT 164 Query 408 CTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATT 467 || |||||||||| || || || || || ||| |||| || || ||||| | ||| Sbjct 165 CTCTACGACTTCATTCCTTCTGAGCCTGGTGAGCTGGCCTTTAAGAAGGGCGATGTCATT 224 Query 468 GCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGC 527 || || | || || || ||||||||||||||||| || ||| ||||||||||||| || Sbjct 225 GCCGTGATTGAATCGGTATACAAGGACTGGTGGAAAGGATCTTTGCGTGGACAGACTGGT 284 Query 528 ATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGA 587 |||||||| || ||||| || || |||||||| |||||||| | |||||||| || ||| Sbjct 285 ATCTTCCCGCTGAACTACGTTGAAAAGCTGCAAGATCCTACGAGAGAGGAGCTTGAAAGA 344 Query 588 GAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 || ||||||| |||||||| ||||| | | |||| ||| || |||||| Sbjct 345 GATGCTCAGACCGAGGCGGATGTCTTCTCACAAATCAGGAATGTCGAGAAG 395 >seq420618 Length=183 Score = 93.3 bits (102), Expect = 1e-15 Identities = 122/166 (73%), Gaps = 6/166 (4%) Strand=Plus/Minus Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746 || ||||||||| |||||| || |||| |||| || || || |||||||| |||||| Sbjct 162 GACGAGATCACTGATCTGTACAACCAGACCTTGTCAATTCGACCCAAGTTGATTGAGCTC 103 Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTTTAC--GCGAATTTGTGTGTT 804 || || || || ||||| ||||||||| ||| | ||| || | || | | || Sbjct 102 ATCGGAAAATACTCGCAGAAGAAGGGTGAGTTG---CTTGAACATGTGAGAGCGAGAATT 46 Query 805 GGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAG 850 || ||||| ||| ||||||| ||||||||||| ||||||||| Sbjct 45 GGAGACTGA-CGTTCGACAGATGAGTTCACGCAGCTGAACGAGAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849343264425