Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_008190.1 Length=1791 Score E Sequences producing significant alignments: (Bits) Value seq13 100 3e-18 >seq13 Length=83567108 Score = 100 bits (110), Expect = 3e-18 Identities = 108/141 (77%), Gaps = 8/141 (6%) Strand=Plus/Plus Query 411 TTCTACTATCTCAACAAGATGGACTCCTTGATG--GTCCAAACTCTCAAC--TGGACAAA 466 |||||||| ||||| | |||||| | ||||| ||||| | ||| ||||| || Sbjct 8770171 TTCTACTACCTCAATAGTATGGACCACCTGATGACGTCCACAA----AACGATGGACCAA 8770226 Query 467 CAACTGCTCTGGATGGGTTCCCCCATACTCCCAGATCTACATCAGCATGCTTCTCTATCT 526 |||||| || ||||| || || ||||| |||||||||||| ||||||||||||| | Sbjct 8770227 TAACTGCATGGGCTGGGTACCTCCTTACTCTCAGATCTACATCTGCATGCTTCTCTACAT 8770286 Query 527 TCAAGTAATGCGCGCCATGAA 547 |||| | ||||| |||||||| Sbjct 8770287 TCAAATTATGCGAGCCATGAA 8770307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5621817793452