Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_033771.1 Length=1762 Score E Sequences producing significant alignments: (Bits) Value seq4 78.8 1e-11 >seq4 Length=33175494 Score = 78.8 bits (86), Expect = 1e-11 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 1096 ACTGGTTCCAGCACACAGCCATAGTCATGCAGAAGTACTGTCAGTACTTCAATGGCTCCG 1155 ||||||||||||||||| ||| |||||||| || || | |||||||||| ||||| | Sbjct 26646938 ACTGGTTCCAGCACACATGCATTGTCATGCATAACTATTCAAAGTACTTCAACGGCTCTG 26646879 Query 1156 TTCCCCTCAAATCAATCAGCCCCACTGGCATCGGCGCTGTCGCCGT 1201 | ||| | | || || ||| || || |||| ||||||||||| Sbjct 26646878 TCCCCTTGAGCTCGATTCTCCCGACCGGACTCGGTGCTGTCGCCGT 26646833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5529027403008