Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_007242.1 Length=1779 Score E Sequences producing significant alignments: (Bits) Value seq11 82.4 9e-13 >seq11 Length=45114658 Score = 82.4 bits (90), Expect = 9e-13 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 380 TTCAACTTTTTCATCCCAGACTCCCAAATGATGTTTCACTCTTTAGGTATCTGCGACTCA 439 ||||||| |||| |||| ||| | |||||| | || ||| | || ||||||||| Sbjct 36437776 TTCAACTCTTTCGTCCCCGACGCTCAAATGCTATTCCACGTCCTCGGAATCTGCGACCAG 36437835 Query 440 ATGATGAACTCCACCGATCGTTTTCTTCGATCCTCACCCGCTTGGCTCCCCATCGTTTCA 499 | ||| | ||||| | ||||| || || || || | ||||||||||| || ||| Sbjct 36437836 CTAATGCTCACCACCACCCAGTTTCTCCGGTCTTCTCCTTCCTGGCTCCCCATTGTCTCA 36437895 Query 500 CAACTTTACATCTCTGTACTGTGGAATGTTATGATTATCCGCA 542 || || ||||||||| | || |||||| | | || |||||| Sbjct 36437896 CAGCTCTACATCTCTCTTCTCTGGAATTTCACCATCCTCCGCA 36437938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5583918361920