Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_008190.1 Length=1791 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 6e-15 >seq9 Length=46179939 Score = 89.7 bits (98), Expect = 6e-15 Identities = 105/140 (75%), Gaps = 8/140 (6%) Strand=Plus/Minus Query 410 CTTCTACTATCTCAACAAGATGGACTCCTTGATG--GTCCAAACTCTCAAC--TGGACAA 465 ||||||||| ||||| | |||||| | ||||| ||||| | ||| ||||| | Sbjct 471187 CTTCTACTACCTCAATAGCATGGACCACCTGATGACGTCCACAA----AACGATGGACCA 471132 Query 466 ACAACTGCTCTGGATGGGTTCCCCCATACTCCCAGATCTACATCAGCATGCTTCTCTATC 525 | |||||| || ||||| || || ||||| |||||||||||| |||||| |||||| Sbjct 471131 ATAACTGCATGGGCTGGGTGCCTCCTTACTCTCAGATCTACATCGCCATGCTGCTCTATA 471072 Query 526 TTCAAGTAATGCGCGCCATG 545 ||||| ||||| |||||| Sbjct 471071 TTCAAACTATGCGAGCCATG 471052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5622317800512