Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_022617.1 Length=1710 Score E Sequences producing significant alignments: (Bits) Value seq11 84.2 2e-13 >seq11 Length=45114658 Score = 84.2 bits (92), Expect = 2e-13 Identities = 104/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 328 TCTTT-GTCCCTGACTCCCAAATGCTCTTTCACGTTTTGGGTATGTGTGACCAAATGATG 386 ||||| ||||| ||| | |||||||| || ||||| | || || || ||||| | ||| Sbjct 36437782 TCTTTCGTCCCCGACGCTCAAATGCTATTCCACGTCCTCGGAATCTGCGACCAGCTAATG 36437841 Query 387 AACTCTACTGACCGATTTCTTAGGTCCTCCCCTGCTTGGCTCCCTATCGTCTCCCAGCTT 446 | | || || ||||| |||| || ||| | |||||||| || ||||| ||||| Sbjct 36437842 CTCACCACCACCCAGTTTCTCCGGTCTTCTCCTTCCTGGCTCCCCATTGTCTCACAGCTC 36437901 Query 447 TACATAGCTGTTCTCTGGAAT 467 ||||| || ||||||||||| Sbjct 36437902 TACATCTCTCTTCTCTGGAAT 36437922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5363121590016