Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_033771.1 Length=1762 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 4e-17 >seq11 Length=45114658 Score = 96.9 bits (106), Expect = 4e-17 Identities = 115/153 (75%), Gaps = 5/153 (3%) Strand=Plus/Plus Query 375 AACACCTTCGTCCCTGACGCCCAGATGCTTTTCCATGTCCTCAGCTTATGCGACAACATG 434 ||| | |||||||| ||||| || ||||| ||||| |||||| | | |||||| | | Sbjct 36437779 AACTCTTTCGTCCCCGACGCTCAAATGCTATTCCACGTCCTCGGAATCTGCGACCAGCTA 36437838 Query 435 ATGCTGTCTACCGACC-GTTTCACCCGCTCTGCTCCCGCCTGGCTCCCCATCGTCTCGCA 493 ||||| | ||| || ||||| || | ||| |||| ||||||||||||| ||||| || Sbjct 36437839 ATGCTCACCACCACCCAGTTTCTCCGG-TCTTCTCCTTCCTGGCTCCCCATTGTCTCACA 36437897 Query 494 GCTTTACATTTCCATCCTTTGG---TTCACCAT 523 ||| ||||| || | || ||| |||||||| Sbjct 36437898 GCTCTACATCTCTCTTCTCTGGAATTTCACCAT 36437930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5529519157248