Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_008190.1 Length=1791 Score E Sequences producing significant alignments: (Bits) Value seq1043 95.1 1e-16 >seq1043 Length=1777542 Score = 95.1 bits (104), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 8/141 (6%) Strand=Plus/Minus Query 411 TTCTACTATCTCAACAAGATGGACTCCTTGATG--GTCCAAACTCTCAAC--TGGACAAA 466 |||||||| ||||| | |||||| | ||||| ||||| | ||| ||||| || Sbjct 340421 TTCTACTACCTCAATAGTATGGACCACCTGATGACGTCCACAA----AACGATGGACCAA 340366 Query 467 CAACTGCTCTGGATGGGTTCCCCCATACTCCCAGATCTACATCAGCATGCTTCTCTATCT 526 |||||| || ||||| || || ||||| |||||||||||| ||||||||||||| | Sbjct 340365 TAACTGCATGGGCTGGGTACCTCCTTACTCTCAGATCTACATCTGCATGCTTCTCTACAT 340306 Query 527 TCAAGTAATGCGCGCCATGAA 547 |||| ||||| |||||||| Sbjct 340305 TCAAACTATGCGAGCCATGAA 340285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5622247966790