Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_011557.1 Length=1783 Score E Sequences producing significant alignments: (Bits) Value seq4 104 3e-19 >seq4 Length=53719093 Score = 104 bits (114), Expect = 3e-19 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 387 AACACCTTTGTCCCTGATGCTCAGATGCTATTCCATGTCCTTGGAATCTGTGATCAAATG 446 ||| | || ||||| || ||||| ||||||||||| ||||| |||||||| || || | Sbjct 47634099 AACTCTTTCGTCCCCGACGCTCAAATGCTATTCCACGTCCTCGGAATCTGCGACCAGCTA 47634040 Query 447 ATGCTTTCAACTGATCGCTTTACGCGTTCATCTCCTGCTTGGATCCCCATCGTCTCACAG 506 ||||| | || | ||| || || |||||| | ||| |||| |||||||||||| Sbjct 47634039 ATGCTCACCACCACCCAGTTTCTCCGATCTTCTCCTTCCTGGCTCCCGATCGTCTCACAG 47633980 Query 507 CTTTACATCTCTGTACTCTGGA 528 || ||||||||| | ||||||| Sbjct 47633979 CTCTACATCTCTCTCCTCTGGA 47633958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5594844401124