Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= NC_022615.1 Length=1837 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 2e-14 >seq4 Length=53719093 Score = 87.8 bits (96), Expect = 2e-14 Identities = 104/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 387 TCTTT-GTCCCTGACTCTCAGATGCTCTTCCATGTGCTGAGTATTTGTGACCAAATGATG 445 ||||| ||||| ||| |||| ||||| ||||| || || | || || ||||| | ||| Sbjct 47634096 TCTTTCGTCCCCGACGCTCAAATGCTATTCCACGTCCTCGGAATCTGCGACCAGCTAATG 47634037 Query 446 AACTCTACTGAACGATTTCTTCGTTCTTCTCCTGCCTGGATGCCCATTGTCTCACAGCTC 505 | | || | ||||| || ||||||||| ||||| | || || |||||||||||| Sbjct 47634036 CTCACCACCACCCAGTTTCTCCGATCTTCTCCTTCCTGGCTCCCGATCGTCTCACAGCTC 47633977 Query 506 TACATTTCAGTTCTCTGGAA 525 ||||| || | |||||||| Sbjct 47633976 TACATCTCTCTCCTCTGGAA 47633957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5767584022428