Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_022615.1 Length=1837 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 9e-13 >seq5 Length=34971402 Score = 82.4 bits (90), Expect = 9e-13 Identities = 103/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 387 TCTTT-GTCCCTGACTCTCAGATGCTCTTCCATGTGCTGAGTATTTGTGACCAAATGATG 445 ||||| ||||| ||| |||| ||| | ||||| || || || || || ||||| | ||| Sbjct 9103575 TCTTTCGTCCCCGACACTCAAATGATGTTCCACGTCCTCAGAATCTGCAACCAACTAATG 9103634 Query 446 AACTCTACTGAACGATTTCTTCGTTCTTCTCCTGCCTGGATGCCCATTGTCTCACAGCTC 505 | | | ||| | | ||||| | ||||| ||| ||| | || || |||||||||||| Sbjct 9103635 ACCACCACTCACCATTTTCTCCAGTCTTCCCCTTTATGGCTCCCAATCGTCTCACAGCTC 9103694 Query 506 TACATTTCAGTTCTCTGGAA 525 || |||| |||||||||| Sbjct 9103695 TATGTTTCCCTTCTCTGGAA 9103714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5767318829976