Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_030890.1 Length=1763 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 2e-14 >seq33 Length=678963 Score = 87.8 bits (96), Expect = 2e-14 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 415 CCTTCCTGCCACATGATGGACTACATTCTTCACTCTATCAATTCAACTCTCTG--TGATA 472 ||||||||| ||||||||||| || | |||| || || ||| || ||||| Sbjct 530003 CCTTCCTGCTTGATGATGGACTATGTTGTCCACTTGATGAA--CAAGCACCTAGTTGATA 529946 Query 473 ATTACTACTTCAAGAGAGAAACTCCAAACTACCACCCTTACATTCTCCGACTCTACTTCG 532 |||||||||| || |||| || ||| ||||||| || || || || || |||||||| | Sbjct 529945 ATTACTACTTTAAAAGAGTAAATCCTGACTACCATCCATATATACTACGCCTCTACTTTG 529886 Query 533 GAGTTCTTTTCTGGGTTCAGTGCTTGCGCGCTGG 566 | || | || ||| |||||||| | || ||||| Sbjct 529885 GCGTATTATTTTGGATTCAGTGCCTTCGTGCTGG 529852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5532141714372