Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_030890.1
Length=1763
Score E
Sequences producing significant alignments: (Bits) Value
seq33 87.8 2e-14
>seq33
Length=678963
Score = 87.8 bits (96), Expect = 2e-14
Identities = 113/154 (73%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 415 CCTTCCTGCCACATGATGGACTACATTCTTCACTCTATCAATTCAACTCTCTG--TGATA 472
||||||||| ||||||||||| || | |||| || || ||| || |||||
Sbjct 530003 CCTTCCTGCTTGATGATGGACTATGTTGTCCACTTGATGAA--CAAGCACCTAGTTGATA 529946
Query 473 ATTACTACTTCAAGAGAGAAACTCCAAACTACCACCCTTACATTCTCCGACTCTACTTCG 532
|||||||||| || |||| || ||| ||||||| || || || || || |||||||| |
Sbjct 529945 ATTACTACTTTAAAAGAGTAAATCCTGACTACCATCCATATATACTACGCCTCTACTTTG 529886
Query 533 GAGTTCTTTTCTGGGTTCAGTGCTTGCGCGCTGG 566
| || | || ||| |||||||| | || |||||
Sbjct 529885 GCGTATTATTTTGGATTCAGTGCCTTCGTGCTGG 529852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5532141714372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |