Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_009519.1 Length=1734 Score E Sequences producing significant alignments: (Bits) Value seq6 212 7e-52 >seq6 Length=8244739 Score = 212 bits (234), Expect = 7e-52 Identities = 369/534 (69%), Gaps = 7/534 (1%) Strand=Plus/Plus Query 516 GTTAAATGGGTCAGATCCTCCGCCGCTGGTTATGGTTACGTTGGTCGCAAAAGCGATAAT 575 ||||| ||||| |||| || || | ||| ||||| ||| || || | ||| Sbjct 2516652 GTTAAGTGGGTTCGATCATCGGCAGTTGGCTATGGATACTCAAGTTTGAAGGGAGATTCA 2516711 Query 576 GATAACTATTTTAGAGCTCGAAAGACTGCTTTCACTATAGCAGAAAAGCTCAACCACGAT 635 |||||||| | | |||| |||| || ||||| || ||||| || | ||||| || Sbjct 2516712 GATAACTACCTCATAGCTAGAAATACCGCTTTTACAATAGCTGAGTCTTTGAACCATGAC 2516771 Query 636 CGCGACTACGGTCCGCTAGCTCTCGAAGACTCTACACCTGACATAGCGTTCACACGAACA 695 || || || || || | |||||| || |||||||||||| || || || |||| Sbjct 2516772 CGTGATTATGGGCCACGAGCTCTATTAGGCTCTACACCTGATGATGCTTTTACTAGAACG 2516831 Query 696 CAACTATGCCAAATCAAGGTGAAGAGAAAGATTAGGAATGTTTGGGGAGAGGCGTTTCAT 755 ||| |||| | || || ||||||||||| ||||||| ||||| ||||| || || | | Sbjct 2516832 CAATTATGTTAGATGAAAGTGAAGAGAAAAGTTAGGAACGTTTGAGGAGAAGCATTCCTT 2516891 Query 756 TACGTCCTACTTGAAGG-TCTGTTCGCAGATCCCATTATTCAGCACTTTATACGGA---A 811 ||| |||| | ||||| | | || || || || | || | || |||||| ||| | Sbjct 2516892 TACATCCTCTTAGAAGGATTTATTTGCTGACCCACTCATCGAACATTTTATAGGGAGTGA 2516951 Query 812 CAAGTCGTTCTACTTTATTGGAGAAGACCCGCTGCTTGCTGTCCCCCGCCTAGTCGAGAA 871 ||| ||||||| ||| || | | || || ||| ||| || | ||| ||||| Sbjct 2516952 CAA---CTTCTACTCTATAGGCCACCATCCTTTGTTTGTTGTTCCTCTACTAATCGAGGT 2517008 Query 872 GATATTATCAGAACAAGACTACGTCTACATGTTTGACTGGTCTGGTTTCGATGCCTCAGT 931 |||||| ||| | |||||||||||||||||||||| ||| | ||||||| ||| || Sbjct 2517009 CATATTACGAGATAATGACTACGTCTACATGTTTGACTAGTCAGTTTTCGATTCCTTAGA 2517068 Query 932 ACAAGAATGGGAAATTCGTTTTGCCTTTTCGTTACTTGAGAGTATCCTGATCTTTCCCTC 991 || |||||||||| || |||| | |||| | |||| | || || | ||||| | Sbjct 2517069 ACGAGAATGGGAATTTTGTTTCGTCTTTGAGCTACTGAAATCAATACTCGTATTTCCTTT 2517128 Query 992 AAGTGTCGAATCTTACATTTGGCATTTCATTATTGAGCTGTTCATCTACCGCAA 1045 || | |||| ||| | |||| || |||||| | ||||| | |||| ||| Sbjct 2517129 GAGCTTTGAATTCTACGTATGGCGATTAATTATTAAATTGTTCGTATACCCCAA 2517182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5438181380800