Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_010346.1 Length=1749 Score E Sequences producing significant alignments: (Bits) Value seq6 239 5e-60 >seq6 Length=8244739 Score = 239 bits (264), Expect = 5e-60 Identities = 524/776 (68%), Gaps = 27/776 (3%) Strand=Plus/Plus Query 201 GGTATTCCTAGAGGTCTCATTGAGCTCGAAGAAATCCCGACGCGACGCTTACGCGAGGAG 260 || |||| | ||| ||| | ||| ||||||||||| || ||||| | ||||||||| Sbjct 2516347 GGAATTCGTCAAGGGCTCCTAACGCTTGAAGAAATCCCCACTCGACGAGTGCGCGAGGAG 2516406 Query 261 TGCGT---AATACATATAGACGCCTGGAGCT-CACAAGCAATA-GACGCCATAGTACCGC 315 | ||| | | || | | ||| || ||||||| || | | |||||||| Sbjct 2516407 ATCAAGCAAATTCTACTTGATGAGTAT-GCTACAGAAGCAATCTGAAGAC-TAGTACCGT 2516464 Query 316 TCTCACTACGCAACGAACTAGATGGCTGGGCCAGAAGCTACTACACGCTTCAAGCA--CA 373 | ||| |||| || |||||||||||||| ||||||||||| ||||| ||||| || Sbjct 2516465 TTGGACTTCGCATGGAGCTAGATGGCTGGGCGAGAAGCTACTATACGCT--AAGCATGCA 2516522 Query 374 CGTTGATTCGCTCATGCAATATGATCGACCAAAGTTGCAACCACCCACCAATACCGCGTG 433 | ||| | | ||||| || | ||||||||||| | || |||| || || Sbjct 2516523 TATAGATGCTATTATGCAGTACAACAAACCAAAGTTGCCTGCGCCGTCCAACGAAGCATG 2516582 Query 434 GAATATCACCACACAGTATATTCGGACTGAATTTGCTAGGATGAAGAAAGTGACTGCATT 493 | ||| ||| || ||| || || ||| | || || || | || Sbjct 2516583 GGTTATGACCCTGCATCATACTCT-AC-------------ATGGATAAGGTTACACCTTT 2516628 Query 494 GTC-TTATCTTCAACTTGACCAAGTTAAATGGGTCAGATCCTCAGCTGCCGGCTACGGTT 552 || ||||| | | | | || ||||| ||||| |||| || || | ||||| || | Sbjct 2516629 TTCATTATCATGAGTTCGTCCGCGTTAAGTGGGTTCGATCATCGGCAGTTGGCTATGGAT 2516688 Query 553 ACACAGGTCGTAAAAGCGACGGTGATAACTACATTCGAGCTCGCAAAACTGCTTTTACTT 612 || || || || | || ||||||||| | |||| | || || |||||||| Sbjct 2516689 ACTCAAGTTTGAAGGGAGATTCAGATAACTACCTCATAGCTAGAAATACCGCTTTTACAA 2516748 Query 613 TAGCAGAGAAGCTCAATCATAACCGAGACTACGGTCCACTAGCTCTAGAAGACTCTACAC 672 |||| ||| | || ||| |||| || || || |||| ||||||| || |||||||| Sbjct 2516749 TAGCTGAGTCTTTGAACCATGACCGTGATTATGGGCCACGAGCTCTATTAGGCTCTACAC 2516808 Query 673 CCGATGTAGCTTTCACCAGAACACAGCTATGTCAGATTAAGGTGAAGAGAAAAATTAGGA 732 | |||| ||||| || ||||| || ||||| |||| || |||||||||||| |||||| Sbjct 2516809 CTGATGATGCTTTTACTAGAACGCAATTATGTTAGATGAAAGTGAAGAGAAAAGTTAGGA 2516868 Query 733 ATGTTTGGGGTGAAGCGTTTCATTACGTCCTACTAGAAGG-TCTGTTCGCAGATCCACTT 791 | ||||| || ||||| || | |||| |||| ||||||| | | || || || ||||| Sbjct 2516869 ACGTTTGAGGAGAAGCATTCCTTTACATCCTCTTAGAAGGATTTATTTGCTGACCCACTC 2516928 Query 792 ATCCAGCAATTCATGCGCATTAAATCATTCTACTTTATTGGAGAAGATCCGCTACTTGCT 851 ||| | || || || | | | | ||||||| ||| || | |||| | ||| | Sbjct 2516929 ATCGAACATTTTATAGGGAGTGACAACTTCTACTCTATAGGCCACCATCCTTTGTTTGTT 2516988 Query 852 GTCCCCCGCCTAATCGAGGAGATTCTATCCGAGCAAGACTACATCTACATGTTTGATTGG 911 || || | |||||||||| || || || | |||||| ||||||||||||| | | Sbjct 2516989 GTTCCTCTACTAATCGAGGTCATATTACGAGATAATGACTACGTCTACATGTTTGACTAG 2517048 Query 912 TCTGGCTTTGATGCCTCAGTACAAGAATGGGAACTACGTTTTGCCTTCGGCCTACT 967 || | || ||| ||| || || |||||||||| | |||| | ||| | ||||| Sbjct 2517049 TCAGTTTTCGATTCCTTAGAACGAGAATGGGAATTTTGTTTCGTCTTTGAGCTACT 2517104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5486165334160