Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19] 45,088 sequences; 567,661,845 total letters Query= NC_011557.1 Length=1783 Score E Sequences producing significant alignments: (Bits) Value seq15408 134 2e-28 >seq15408 Length=95334 Score = 134 bits (148), Expect = 2e-28 Identities = 199/282 (71%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 392 CTTTGTCCCTGATGCTCAGATGCTATTCCATGTCCTTGGAATCTGTGATCAAATGATGCT 451 ||| || |||||||| |||||||| || ||||| || || ||||| || |||||| Sbjct 36103 CTTCGTTCCTGATGCGCAGATGCTTTTTCATGTTCTAGGCATCTGCGACGGTATGATGAA 36044 Query 452 TTCAACTGATCGCTTTACGCGTTCATCTCCTGCTTGGATCCCCATCGTCTCACAGCTTTA 511 | ||||| |||||| | ||| |||||||||| ||||||||||||| |||||||| Sbjct 36043 CACCACTGACCGCTTTCTGAAGTCAAATCCTGCTTGGCTCCCCATCGTCTCTCAGCTTTA 35984 Query 512 CATCTCTGTACTCTGGATGGTTGCTATCCTCAGAGTCTTTGTTGCCTCCGGTTACGGAGC 571 |||||||| || |||| | || || |||| ||| | || || || || || Sbjct 35983 TATCTCTGTGCTTTGGAATTTCATGATTATCCGAGTTTTTAATAAGTCTGGCTATGGTGC 35924 Query 572 ACTCTACTCTTCTCTTATCAATGACCTCATCGGTCACCTTCGTATCGATGAGTGCATGAT 631 | | | | || | ||||| | | | || ||||||||||| || ||||| Sbjct 35923 TGCGTTCATTCCCATTCTGAATGATTATGTGAGAAATCTCCGTATCGATGAATGTATGAT 35864 Query 632 TCCCGGACCTCTGGTCCCGTTTTTCCAATCTCTTGGTGCCGT 673 ||| || ||||| ||||| ||||||||| |||||| ||| || Sbjct 35863 TCCTGGGCCTCTCGTCCCCTTTTTCCAAGCTCTTGCTGCTGT 35822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5594118796992