Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_011557.1
Length=1783
Score E
Sequences producing significant alignments: (Bits) Value
seq15408 134 2e-28
>seq15408
Length=95334
Score = 134 bits (148), Expect = 2e-28
Identities = 199/282 (71%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 392 CTTTGTCCCTGATGCTCAGATGCTATTCCATGTCCTTGGAATCTGTGATCAAATGATGCT 451
||| || |||||||| |||||||| || ||||| || || ||||| || ||||||
Sbjct 36103 CTTCGTTCCTGATGCGCAGATGCTTTTTCATGTTCTAGGCATCTGCGACGGTATGATGAA 36044
Query 452 TTCAACTGATCGCTTTACGCGTTCATCTCCTGCTTGGATCCCCATCGTCTCACAGCTTTA 511
| ||||| |||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct 36043 CACCACTGACCGCTTTCTGAAGTCAAATCCTGCTTGGCTCCCCATCGTCTCTCAGCTTTA 35984
Query 512 CATCTCTGTACTCTGGATGGTTGCTATCCTCAGAGTCTTTGTTGCCTCCGGTTACGGAGC 571
|||||||| || |||| | || || |||| ||| | || || || || ||
Sbjct 35983 TATCTCTGTGCTTTGGAATTTCATGATTATCCGAGTTTTTAATAAGTCTGGCTATGGTGC 35924
Query 572 ACTCTACTCTTCTCTTATCAATGACCTCATCGGTCACCTTCGTATCGATGAGTGCATGAT 631
| | | | || | ||||| | | | || ||||||||||| || |||||
Sbjct 35923 TGCGTTCATTCCCATTCTGAATGATTATGTGAGAAATCTCCGTATCGATGAATGTATGAT 35864
Query 632 TCCCGGACCTCTGGTCCCGTTTTTCCAATCTCTTGGTGCCGT 673
||| || ||||| ||||| ||||||||| |||||| ||| ||
Sbjct 35863 TCCTGGGCCTCTCGTCCCCTTTTTCCAAGCTCTTGCTGCTGT 35822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5594118796992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |