Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_022615.1
Length=1837
Score E
Sequences producing significant alignments: (Bits) Value
seq15408 147 3e-32
>seq15408
Length=95334
Score = 147 bits (162), Expect = 3e-32
Identities = 211/294 (72%), Gaps = 10/294 (3%)
Strand=Plus/Minus
Query 384 ACTTCTTTGTCCCTGACTCTCAGATGCTCTTCCATGTGCTGAGTATTTGTGACCAAATGA 443
||| ||| || ||||| | |||||||| || ||||| || | || || ||| ||||
Sbjct 36107 ACTACTTCGTTCCTGATGCGCAGATGCTTTTTCATGTTCTAGGCATCTGCGACGGTATGA 36048
Query 444 TGAACTCTACTGAACGATTTCTTCGTTCTTCTCCTGCCTGGATGCCCATTGTCTCACAGC 503
||||| | ||||| || ||||| || |||||| ||| | ||||| ||||| ||||
Sbjct 36047 TGAACACCACTGACCGCTTTCTGAAGTCAAATCCTGCTTGGCTCCCCATCGTCTCTCAGC 35988
Query 504 TCTACATTTCAGTTCTCTGGAATGTCATGATTCTCAATGTTTTTGTCAACTCTGGCTATG 563
| || || || || || |||||| |||||||| || |||||| || ||||||||||
Sbjct 35987 TTTATATCTCTGTGCTTTGGAATTTCATGATTATCCGAGTTTTTAATAAGTCTGGCTATG 35928
Query 564 GCTCCGCCTTTTCTTCGTTCCTA-TCTGAA-CTTTATG---GCGTCCTCCGGATCGACGA 618
| | || ||| |||| | |||||| ||||| | ||||| ||||| ||
Sbjct 35927 GTGCTGC-----GTTCATTCCCATTCTGAATGATTATGTGAGAAATCTCCGTATCGATGA 35873
Query 619 ATGCATGATCCCCGGACCACTCGTCCCCTTCTTCCAAGCTTTGGCCGCCGTCAA 672
||| ||||| || || || ||||||||||| ||||||||| | || || || ||
Sbjct 35872 ATGTATGATTCCTGGGCCTCTCGTCCCCTTTTTCCAAGCTCTTGCTGCTGTGAA 35819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5766836015424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |