Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_008190.1 Length=1791 Score E Sequences producing significant alignments: (Bits) Value seq110 89.7 6e-15 >seq110 Length=4329799 Score = 89.7 bits (98), Expect = 6e-15 Identities = 168/243 (69%), Gaps = 12/243 (5%) Strand=Plus/Minus Query 310 CTGACCTAGAGACTGCTCTCTTTGATTCAGCCGTCAACCAcccccccACCCCGGTCTCCT 369 ||||||||||||| || |||| | | | || | |||| ||| | || | | | | Sbjct 4102613 CTGACCTAGAGACAGCGATCTTGGCTACTGCTGCCAACTTCCCGTTCGCCAAGTTGACAT 4102554 Query 370 ATCCGTCTACCTCATCCTACATCCCCAACTTCACTTCCGC--CTTCTACTATCTCAACAA 427 | || ||| ||| | | ||| ||| ||| | || || |||||| || ||||||| Sbjct 4102553 ACCCTGCTAGATCAACATTCATTCCCTGCTTTA--TCAGCATCTTCTATTACCTCAACAG 4102496 Query 428 GATGGACTCCTTGATG--GTCCAAACTCTCAAC--TGGACAAACAACTGCTCTGGATGGG 483 |||||| | ||||| ||||| || ||| |||||| |||||||| || |||| Sbjct 4102495 GATGGATTTTCTGATGACGTCCA----CTAAACGATGGACAGACAACTGCATGGGCTGGG 4102440 Query 484 TTCCCCCATACTCCCAGATCTACATCAGCATGCTTCTCTATCTTCAAGTAATGCGCGCCA 543 | || || | ||| || || ||||| ||||||| ||||| ||||| ||||| |||| Sbjct 4102439 TACCTCCTTGCTCTCAAATATACATTGGCATGCTGCTCTACATTCAAACCATGCGAGCCA 4102380 Query 544 TGA 546 ||| Sbjct 4102379 TGA 4102377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5622390441920