Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_022615.1 Length=1837 Score E Sequences producing significant alignments: (Bits) Value seq72 104 3e-19 >seq72 Length=2807273 Score = 104 bits (114), Expect = 3e-19 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 330 TGCTCGAGCTCGCTGCCG--CAACTCCTATGTACACGGAACAACGCCGTGCTACAAACTT 387 |||||||| |||||||| |||| ||||| | || | || ||| | | |||| Sbjct 438661 TGCTCGAGATCGCTGCCTTACAAC-CCTATCAA-ACCGTACCTCGCTCTCCCTTCAACTC 438604 Query 388 CTTTGTCCCTGACTCTCAGATGCTCTTCCATGTGCTGAGTATTTGTGACCAAATGATGAA 447 || ||||| ||| |||| ||||| || || || || | || || ||||||||||||| Sbjct 438603 TTTCGTCCCCGACGCTCAAATGCTATTTCACGTTCTCGGAATCTGCGACCAAATGATGAT 438544 Query 448 CTCTACTGAACGATTTCTTCGTTCTTCTCCTGCCTGGATGCCCATTGTCTCACAGCTCTA 507 | | ||| | | ||| || || ||||| ||| ||||| | || || || ||||||||||| Sbjct 438543 CACCACTCACCAATTCCTCCGATCTTCCCCTTCCTGGCTCCCAATCGTTTCACAGCTCTA 438484 Query 508 CATTTCAGTTCTCTGGAATGTCA 530 | || ||||||||||| ||| Sbjct 438483 TGTATCTCTTCTCTGGAATTTCA 438461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5769590191680