Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_022617.1 Length=1710 Score E Sequences producing significant alignments: (Bits) Value seq72 116 4e-23 >seq72 Length=2807273 Score = 116 bits (128), Expect = 4e-23 Identities = 111/141 (79%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 328 TCTTT-GTCCCTGACTCCCAAATGCTCTTTCACGTTTTGGGTATGTGTGACCAAATGATG 386 ||||| ||||| ||| | |||||||| ||||||||| | || || || |||||||||||| Sbjct 438605 TCTTTCGTCCCCGACGCTCAAATGCTATTTCACGTTCTCGGAATCTGCGACCAAATGATG 438546 Query 387 AACTCTACTGACCGATTTCTTAGGTCCTCCCCTGCTTGGCTCCCTATCGTCTCCCAGCTT 446 | | | ||| ||| ||| || | || |||||| | |||||||| ||||| || ||||| Sbjct 438545 ATCACCACTCACCAATTCCTCCGATCTTCCCCTTCCTGGCTCCCAATCGTTTCACAGCTC 438486 Query 447 TACATAGCTGTTCTCTGGAAT 467 || || || ||||||||||| Sbjct 438485 TATGTATCTCTTCTCTGGAAT 438465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5363190882560