Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euclidium_20syriacum_20[genbank_20GCA_5F900116095.1_202016-12-31] 160 sequences; 229,211,023 total letters Query= NC_030890.1 Length=1763 Score E Sequences producing significant alignments: (Bits) Value seq75 134 2e-28 >seq75 Length=6520592 Score = 134 bits (148), Expect = 2e-28 Identities = 360/545 (66%), Gaps = 13/545 (2%) Strand=Plus/Minus Query 994 CAGTATCCCTGTGAAGCCGACATGAAGATGAATGAAGCGTTCGCTGAACGTTTCTATGAT 1053 |||||| |||||| || || |||| | ||||| |||||| ||||||| | ||||| Sbjct 1419197 CAGTATTACTGTGAGGCTGATCAGAAGCTAAATGAGGCGTTCTCTGAACGATATGATGAT 1419138 Query 1054 TTTGACTTTCCTGCCTTTAACGCAGATGACAATCTCTCCACCATCACCAACTTCCTCCAC 1113 |||| ||||| | ||| | || | ||| | || || || || || || Sbjct 1419137 TTTGGGTTTCCGGAAACACACGGCGGAGATAGCCTCAAGTCTATGACTAAATTTCTTCAT 1419078 Query 1114 ATGAGGAAAAGTATGGCTTGGTTCATCCGGGCCAAGGAAGTCGCCTGCTCGGCCGCTAGA 1173 |||| |||| ||||||| || | | | || ||||| || | | || || Sbjct 1419077 ATGAAGAAAGACATGGCTTTCTTTACACAAGTTAAAGAAGTTGCTTACGTTGCTGCCTCT 1419018 Query 1174 TTCTTTTCAGACTCTGGCACTCTCGCCGACTGTTCTCCACACGGTCTGGTCTCAAACCAG 1233 |||||| ||| || || || || || || || || || || || |||| ||||||||| Sbjct 1419017 TTCTTTGAAGAATCAGGAACACTTGCTGATTGCTCACCGCATGGCATGGTTTCAAACCAG 1418958 Query 1234 ATCATTGTTGCGATTACTCCTCCACCTGAGGAGACTTTTGCT-GATCCCCGCTTCTCCGC 1292 |||| ||| ||||||| ||| | | || | | | ||| | | ||| Sbjct 1418957 GTCATGGTTTGTCTTACTCCACCAACA----ACACCAGTCCAAGTTCCAAGACACCTCGC 1418902 Query 1293 CGATCCAAGAGCCCTCTATCCCTTCAGTTTCAAGCTGAAGAGCACCGCCCACAACCTCCC 1352 ||| |||| || ||| ||||| | |||||| || ||||| | || |||||||| Sbjct 1418901 TGATAAGCGAGCACTTTATGGATTCAGCTACAAGCTCAAAAGCACTGTTCATAACCTCCC 1418842 Query 1353 CCCACTTGCGGAAGCTGCCGCAGCCTTCTCCCAGACGCACATCCGGATTTTTCCGGAATA 1412 | || |||||||| | || || ||||| ||||| |||||||| || ||| | || | Sbjct 1418841 TCTTCTCGCGGAAGCCACTGCTGCTTTCTCTCAGACACACATCCGTATGTTTGCTGATCA 1418782 Query 1413 CCCGTTGG---CCGGAAACTTTGGTCAAAAGACCGACGAATCA-GGCCCCTTTTGGGACA 1468 ||| || | || |||||| || || | || ||| || ||||| ||| | Sbjct 1418781 CCCTTTCCTTTCTGGT---TTTGGTGCGAAAACAAAAGA-TCATGGACCCTTCTGGTCGA 1418726 Query 1469 TCAGGCCCATTGGCTCCAGCCCCACCGACGACACCTCCTACCTCACCATCCCACCCATGG 1528 |||||||||||| ||| || ||| | |||| |||||||||| ||||||| |||| Sbjct 1418725 TCAGGCCCATTGACTCGAGTGTTACCAATGACAGCTCCTACCTCTCCATCCCTTGGATGG 1418666 Query 1529 TCAAG 1533 ||||| Sbjct 1418665 TCAAG 1418661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5532790594240