Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_030245.1 Length=1536 Score E Sequences producing significant alignments: (Bits) Value seq116099 78.8 9e-12 >seq116099 Length=4485 Score = 78.8 bits (86), Expect = 9e-12 Identities = 114/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 766 CTCGGCCGTCCCAGCTGGCTTTTCGACTGGCATGACGATGATCGAGTCTGTGCTTGGTTC 825 || || || ||| |||||| || ||||||||||| || | || ||||||||||| Sbjct 457 CTAGGACGCCCCTCCTGGCTGTTTGACTGGCATGAGGAGAAACGGTGTTGTGCTTGGTTT 516 Query 826 CCAATGGAAGGGAATTTCACAATGGATGATGTCACTATGGCATATATCCTTGGAGTCGCC 885 || || || || | ||||||||||||| ||||| || || || | |||| ||| Sbjct 517 CCTCCTGAGGGAAACTATACAATGGATGATGCTACTATTGCCTACATTGTCGGAGCAGCC 576 Query 886 TGTACTCCTAAACTCGCCCCATGCGATGTTGATGATTGGCA 926 | |||||| | || | || | || || ||||||||||| Sbjct 577 TCTACTCCGCATCTTGGACCTAGAGACGTCGATGATTGGCA 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4795419154368