Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= NC_030245.1 Length=1536 Score E Sequences producing significant alignments: (Bits) Value seq65862 87.8 2e-14 >seq65862 Length=684 Score = 87.8 bits (96), Expect = 2e-14 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 769 GGCCGTCCCAGCTGGCTTTTCGACTGGCATGACGATGATCGAGTCTGTGCTTGGTTCCCA 828 || || |||| |||||| || |||||||| |||||| | ||||||| ||| || Sbjct 147 GGACGCCCCACCTGGCTGTTTGACTGGCA---CGATGACAAATGTTGTGCTTCGTTTCCT 203 Query 829 ATGGAAGGGAATTTCACAATGGATGATGTCACTATGGCATATATCCTTGGAGTCGCCTGT 888 | ||| || | |||||||| ||||| ||| | || ||||| | |||| |||||| Sbjct 204 CT---AGGAAACTATACAATGGAGGATGTTACTGTTGCCTATATTGTCGGAGCAGCCTGT 260 Query 889 ACTCCTAAACTCGCCCCATGCGATGTTGATGATTGGCA 926 ||||| || || || || | ||||||||||| ||||| Sbjct 261 ACTCCAAATCTTGCACCCAGAGATGTTGATGACTGGCA 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4789896711916