Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_009521.1 Length=1479 Score E Sequences producing significant alignments: (Bits) Value seq34273 107 2e-20 >seq34273 Length=116448 Score = 107 bits (118), Expect = 2e-20 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 871 CAATTGGAACCCCAACCTGTATGCCCAAGCTGTAGACTATGCAAGAAAATTTGGTCTCCA 930 ||||||||| |||||| || ||| |||| || || |||||||||| || || | | Sbjct 47950 CAATTGGAATCCCAACGCCTACGCCGAAGCGGTTGAGTATGCAAGAACCTTAGGAATGCG 47891 Query 931 CTTTAATGTGGTAGACTACACCAAGAAGCAAGGCACTGCCTGGTGGCTGTTACGCCAGCA 990 ||| || | || ||| | |||||| | || || || ||||||||||| || || || Sbjct 47890 ATTTCATATTGTTGACCTGAAGAAGAAGGATGGTACAGCGTGGTGGCTGTTTCGTCAACA 47831 Query 991 CTTTGAAGACGGAATCTTCGAGCTGCAACTCCCACTTCCAGAAGTGAACTTTAC 1044 ||||| ||| ||| | || ||||| || || ||||||||||||||||| || Sbjct 47830 CTTTGCAGAAGGATTTTTTGAGCTACAGTGTCCTCTTCCAGAAGTGAACTTCAC 47777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4620197338000