Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_030890.1 Length=1763 Score E Sequences producing significant alignments: (Bits) Value seq38600 129 6e-27 >seq38600 Length=368032 Score = 129 bits (142), Expect = 6e-27 Identities = 336/503 (67%), Gaps = 12/503 (2%) Strand=Plus/Plus Query 409 TACTACCCTTCCTGCCACATGATGGACTACATTCTTCACTCTATCAATTCAACTCTCT-G 467 ||||| || ||||| || ||||||||||| | ||||| ||||| ||| ||| | | Sbjct 192883 TACTATCCCTCCTGTCATATGATGGACTATACAGTTCACAACATCAA--CAAGTCTTTAG 192940 Query 468 T-GATAATTACTACTTCAAGAGAGAAACTCCAAACTACCACCCTTACATTCTCCGACTCT 526 | ||| ||| | |||||| || ||| ||||||||||| ||||| ||||| |||| Sbjct 192941 TCGATCATTTTCATTTCAAGCGAAGTTATCCTAACTACCACCCATACATCCTCCGCCTCT 193000 Query 527 ACTTCGGAGTTCTTTTCTGGGTTCAGTGCTTGCGCGCTGGAAATGATGTTCAGGTCATTA 586 |||||||||| | |||||| | || || | || | ||| | || | || | | || Sbjct 193001 ACTTCGGAGTATTGTTCTGGATCCAATGTCTCCGAACCGGAGAAGA-GGTCGGCGCCCTA 193059 Query 587 ATGACCT---ACACTACGATTTCTTGCAGCGTTTCCTAGACTGCAATCCTCTCGAGTCTT 643 | |||| ||| | | ||| | | || || |||| | | || | |||||| Sbjct 193060 A--ACCTCGATCACCATCAATTCCTCCTCAACTTTCTCGACTTCCACCCGTTGGAGTCTC 193117 Query 644 TGGCCATTCCAGGCCCACTTCTCGGACTCTTCAAGACACTCTGCTCCTCCCAGCCAGAGT 703 | |||| || || || || ||| ||||||||| || |||||||||||||||| || | Sbjct 193118 TCCCCATCCCTGGTCCCCTCCTCCCACTCTTCAAAACCATCTGCTCCTCCCAGCCGGAAT 193177 Query 704 TCCCACATTATGGGAAAGTTTACCCCCGCATTCCTGCGAGCCCAGGACCAA-GACGCCGA 762 | || | || || || || ||||| ||| | || | ||| || |||| || | Sbjct 193178 TTTCAAACTACGGCAAGGTCTACCCTCGCGTCCCCACCGTCCCCGGCCCAACGAAACGTC 193237 Query 763 GACATGTTCTCAAAGAACGTCCCAAGCGCCCAATTCTTACCCAACGTTCCTGGTATTTTC 822 | || |||| ||| | | | ||| || || | ||||| |||||||| |||||| Sbjct 193238 GCAATTTTCTTCGTGAA-GAACAACACGCGCACTTTCTCCCCAATGTTCCTGGAATTTTC 193296 Query 823 GCACTCATCCACCATCTCCACGGACTTTCTGAGGGTGAACACCCGATTTACCCGAAAAGA 882 || ||| | | || | |||| | | | ||||| | || ||||||| |||| Sbjct 193297 GCCCTCCTTGAACACTTGAACGGGTTAATTAACGGTGAGAATCCTGTTTACCCTAAAATG 193356 Query 883 AAAAGACACATTCCTGTCACTGA 905 | ||||||||| ||||| || Sbjct 193357 CGGAAACACATTCCGGTCACCGA 193379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5530186139296