Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15] 37,194 sequences; 2,365,682,703 total letters Query= NC_010343.1 Length=1717 Score E Sequences producing significant alignments: (Bits) Value seq7 80.6 3e-12 >seq7 Length=114765206 Score = 80.6 bits (88), Expect = 3e-12 Identities = 156/229 (68%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 400 AAAGTTGCCTGAGCCGACAGATGATGTTTGGAACCAAACCAAACAACACACCTTGCAATT 459 |||| ||||||| ||| ||||| |||||| |||||||| ||| | ||||| | Sbjct 92933137 AAAGCTGCCTGAACCGCGTGATGACACTTGGAATCAAACCAAGCAATTCGTGTTGCACAT 92933196 Query 460 GTTCCGAAGATTCCCCAAGATCACACCGATCTCGTACAAGTCGTTTGACGAAGTAAAGTG 519 || | || | || || || | ||| | | || |||||| ||||| | ||| | | Sbjct 92933197 GT-CTGAGGGTTTCCTAAAGTTACAGCTTTATCATACAAGAATTTTGATGCTGTACATTA 92933255 Query 520 GATATCTTCATCCTCCGCCGGTTATGGTTACGTCGGTCACAAAGGTGACGGTGACAATTA 579 | || || || | || || ||||||||||| || | |||||||| || || || Sbjct 92933256 GTTACAATCCTCAGCTGCTGGATATGGTTACGTTGGCCGAAAAGGTGATAACGATAACTA 92933315 Query 580 CCTCAAAGCGAGAAGGACCGCAGTGACGATCGCTGAAAAGCTCGATCAC 628 ||||| | |||| || ||||| |||||||||||||| ||||| Sbjct 92933316 TGCTAAAGCCAAGCGGACGGCCGTGACTATCGCTGAAAAGCTTAATCAC 92933364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5383471684932