Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_030245.1
Length=1536
Score E
Sequences producing significant alignments: (Bits) Value
seq13 89.7 5e-15
>seq13
Length=1673325
Score = 89.7 bits (98), Expect = 5e-15
Identities = 112/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 781 TGGCTTTTCGACTGGCATGACGA-TGATCGAGTCTGTGCTTGGTTCCCAATGGAAGGGAA 839
||||| |||||||||| || || || | || ||||||||||| || | ||||| ||
Sbjct 650178 TGGCTACTCGACTGGCACGAGGACTGCAAGTGT-TGTGCTTGGTTTCCTCTCGAAGGAAA 650120
Query 840 TTTCACAATGGATGATGTCACTATGGCATATATCCTTGGAGTCGCCTGTACTCCTAAACT 899
| ||| ||||| ||||||| | || ||||| || |||| ||||||||||| || ||
Sbjct 650119 CTACACGATGGAGGATGTCATGGTTGCCTATATACTCGGAGCTGCCTGTACTCCCAATCT 650060
Query 900 CGCCCCATGCGATGTTGATGATTGGCAATAC 930
| | |||||||||||||||||| ||
Sbjct 650059 TGGATTCAGAGATGTTGATGATTGGCAAAAC 650029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4806288569624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |