Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_008190.1
Length=1791
Score E
Sequences producing significant alignments: (Bits) Value
seq12073 100 3e-18
>seq12073
Length=6201
Score = 100 bits (110), Expect = 3e-18
Identities = 106/138 (77%), Gaps = 4/138 (3%)
Strand=Plus/Minus
Query 410 CTTCTACTATCTCAACAAGATGGACTCCTTGATGGTCCAAACTCTCAAC--TGGACAAAC 467
|||||||||||||||| | |||||| | ||||| | || | ||| ||||| ||
Sbjct 5069 CTTCTACTATCTCAACTATATGGACCACCTGATGA--CGTACACAGAACGATGGACCAAT 5012
Query 468 AACTGCTCTGGATGGGTTCCCCCATACTCCCAGATCTACATCAGCATGCTTCTCTATCTT 527
|||||| || ||||| || || | ||| |||||||||||||||||||||||||| ||
Sbjct 5011 AACTGCATGGGCTGGGTACCTCCTTTCTCTCAGATCTACATCAGCATGCTTCTCTACATT 4952
Query 528 CAAGTAATGCGCGCCATG 545
||| ||||| ||||||
Sbjct 4951 CAAACCATGCGAGCCATG 4934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5618533039784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |