Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_030245.1 Length=1536 Score E Sequences producing significant alignments: (Bits) Value seq10647 78.8 9e-12 >seq10647 Length=14320 Score = 78.8 bits (86), Expect = 9e-12 Identities = 110/152 (72%), Gaps = 7/152 (5%) Strand=Plus/Minus Query 780 CTGGCTTTTCGACTGGCATGACGATGATCGAGTCT-----GTGCTTGGTTCCCAATGGAA 834 |||||| || ||||||||||| || || ||| | |||||||||| | ||| Sbjct 13849 CTGGCTGTTTGACTGGCATGAAGA-GAAAAAGTGTTGCATGTGCTTGGTTTTCTCCTGAA 13791 Query 835 GGGAATTTCACAATGGATGATGTCACTATGGCATATATCCTTGGAGTCGCCTGTACTCCT 894 |||| | | | |||||||||||| ||||| || || || | ||| |||||||||||| Sbjct 13790 GGGACTAT-ATAATGGATGATGTTACTATTGCCTACATTGTCGGAACCGCCTGTACTCCA 13732 Query 895 AAACTCGCCCCATGCGATGTTGATGATTGGCA 926 | || | || | ||||||||||| ||||| Sbjct 13731 CATCTTGGACCTAGAGATGTTGATGAATGGCA 13700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4790677592704