Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_008190.1 Length=1791 Score E Sequences producing significant alignments: (Bits) Value seq9116 84.2 2e-13 >seq9116 Length=346389 Score = 84.2 bits (92), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 8/155 (5%) Strand=Plus/Plus Query 385 CCTACATCCCCAACTTCACTTCCGCCTTCTACTATCTCAACAAGATGGACTCCTTGATGG 444 ||| |||||| ||| | || | | ||||||| ||||| |||||||| || |||| Sbjct 16727 CCTTCATCCCTTGCTTTATCTCAGTCCTCTACTACCTCAATCAGATGGACCATTTAATGG 16786 Query 445 T--CCAAACTCTCAAC--TGGACAAACAACTGCTCTGGATGGGTTCCCCCATACTCCCAG 500 | ||| || ||| |||||| |||||||| || ||||||||||| ||||| ||| Sbjct 16787 TGTCCA----CTAAACGTTGGACAGACAACTGCATGGGCTGGGTTCCCCCCTACTCTCAG 16842 Query 501 ATCTACATCAGCATGCTTCTCTATCTTCAAGTAAT 535 ||||||||| ||| | ||||| | ||||| || Sbjct 16843 ATCTACATCTCCATTTTGCTCTACATCCAAGTGAT 16877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5618596839968