Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_030890.1 Length=1763 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 6e-15 >seq6 Length=1953702 Score = 89.7 bits (98), Expect = 6e-15 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 415 CCTTCCTGCCACATGATGGACTACATTCTTCACTCTATCAATTCAACTCTCTGTGATAAT 474 ||||| ||| ||||||||||| || | |||| || ||| | ||| |||||| Sbjct 1165482 CCTTCATGCTTAATGATGGACTATGTTGTCCACTTGATGAATAAGAATCTAGTTGATAAC 1165423 Query 475 TACTACTTCAAGAGAGAAACTCCAAACTACCACCCTTACATTCTCCGACTCTACTTCGGA 534 ||||||||||| |||| | ||| ||||||| || || || || || ||||||| ||| Sbjct 1165422 TACTACTTCAAAAGAGTAGTTCCTGACTACCATCCATATATACTACGCCTCTACTACGGC 1165363 Query 535 GTTCTTTTCTGGGTTCAGTGCTTGCGCGCTGG 566 || || || ||| | |||||| | || ||||| Sbjct 1165362 GTACTATTTTGGATCCAGTGCCTTCGTGCTGG 1165331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5528199290068