Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_003884.1 Length=2203 Score E Sequences producing significant alignments: (Bits) Value seq62892 131 2e-27 >seq62892 Length=2478 Score = 131 bits (144), Expect = 2e-27 Identities = 409/622 (66%), Gaps = 20/622 (3%) Strand=Plus/Plus Query 927 CTTTTCACCCGCAATCACATTTCAGACAGAGATGGTATCTTAAAACAAAGACCCGTCTAC 986 || ||||| ||||| |||||||| | | ||||| || | ||| | ||||| ||| Sbjct 1076 CTGTTCACTCGCAACCACATTTCGAAACGTGATGGAATTCTTAAAGTCCGCCCCGTTTAC 1135 Query 987 GCAGTTGATGATCTTTTCCTTACAATCGAATCGATGCTCACATTTCCTGCTCAC-GTCAT 1045 ||||||||||| |||| | | |||||| ||||| ||||| ||| | || || Sbjct 1136 GCAGTTGATGACATTTTTATAATCATCGAACTCATGCTTACATTCCCTT-TGACTGTTCA 1194 Query 1046 TGCTAGAAAACCCGAATGCTGTATTATGTACGGTCTCGAAACAATTCGAGGTTCCAACCA 1105 ||| |||||||| || || || ||||| || |||||||| ||||||||||| || | Sbjct 1195 AGCTCGAAAACCCTCCTGTTGCATAATGTATGGACTCGAAACTATTCGAGGTTCAAATC- 1253 Query 1106 AATAC-TAGACAAAATCGCTTCCGACTACAAATCGTTCTTTACGATCGACTGGTCTGGTT 1164 | ||| | || |||| ||| ||||| | |||||| | | || ||||| ||| Sbjct 1254 ATTACATTGAACAAATAGCTCGTGACTATTCGACCTTCTTTTCTTTAGATTGGTCCAGTT 1313 Query 1165 TTGATCAACGCCTCCCCTGGGTTAT-AGT-AAAGTTATTCTTCACAGAATACATCCCCCG 1222 ||||||||||||||| | || || | | | | |||| | ||| || | ||| | | Sbjct 1314 ATGATCAACGCCTCCCGCGCGTCATCACTGATATTTAT--TACACTGACTTTCTCCGCAG 1371 Query 1223 ATTGCTTGTTGTAAATCACGGTTACGCTCCAACGTATGAGTACCCCTCATACCCTGACC- 1281 | | || |||| || || ||| || || ||||| |||||| | |||||||||| Sbjct 1372 TCTTATAGTGATAAACCATGGATACCAACCGACCTATGAATACCCCACTTACCCTGACCT 1431 Query 1282 ---TCACAACCAATGATATGGTTTCCCGCCTCACGAATCTAATCACATTCCTTGCTACAT 1338 | | || | | |||| | | | |||||| || || || || | Sbjct 1432 TGATGAACACAAGTTGTATGAT----AGAATGGATAATCTACTCTATTTTCTCCACACTT 1487 Query 1339 GGTACTTTAACATGGTATTTGTAACAGCAGATGGATTCTCCTACGTCCGCGAACACGCT- 1397 ||||| ||||||| || || | | ||||| | ||||| | ||||| | | Sbjct 1488 GGTACAATAACATGACTTTCTTACTACCTGATGGTTATGCCTAC--CGCCGAACCTGTTG 1545 Query 1398 -GGTGTACCTTCTGGTATGCTCAACACTCAGTTCCTTGACTCCTTTGGAAACTTATTCTT 1456 |||||||| ||||| | |||||| || | |||||| || ||||| || ||||| | Sbjct 1546 CGGTGTACCCTCTGGACTATACAACACACAATACCTTGATTCTTTTGGCAATCTATTCCT 1605 Query 1457 GCTAATTGATGGCCTTATCGAATTTGGCTCTACTGACGCCGAAATTGATGACATTCTCCT 1516 | || || | | | || ||||| || | ||| ||||||| || | || |||| Sbjct 1606 AATCATAGACGCCATGATTGAATTCGGATTCCTTGATTCCGAAATCGAGAATTTTATCCT 1665 Query 1517 ATTCATTATGGGTGATGATAAC 1538 | || | || ||||||||| Sbjct 1666 CCTAGTTTTAGGAGATGATAAC 1687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6935294197386